Gossypium hirsutum (upland cotton): 107916526
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Entry
107916526 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107916526
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107916526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107916526
NCBI-ProteinID:
XP_016701282
UniProt:
A0A1U8KFT5
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Position
A01:94919263..94927351
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AA seq
625 aa
AA seq
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MPMAHQTSDRMTSTDSAEVFNVMVLDSNILSNPNALTNKDLIAVGSLRDGSSHQSGFMPS
VVESTTTYLPNAYSPEAQFHQEVHKQSSLLPYVNAEGLDNGFHDIYNETASLGFHGLGHS
PQMQQRAYAPVSSYLPPVGDPIGLSNARHFITIDSSYHQPSVSRNIPHVTSKAQFSHLEC
PVNIEQQLVGKRFGLGTNYLPQSGSFDGGRNFFGSSSSLCSSYQGSDGFAVGGFCSDWSK
PFSGKSSLFRPSYAPASPKRVGSLEFSSNDPAMVSFQKGPFNGFGCTSSSSRGYSGSKSD
QRSCHGSVSTNSLGISGHNWPTLAEARQGGSCNDFSCSCTVTLDTLSERNRGPRAFKPKT
QITTKGFIVDSSKNGTINGITNGSYNRQNFVTDYEGAKFFVIKSYSEDNVHKSIKYGVWA
STPIGNKKLDTAYHEAKAKQGTCPVFLLFSVNASAQFCGVAEMVGPVDFDKSVDYWLQNK
WSGQFPVKWHIIKDVPNSQFRHILLESNDNKPVTNSRDTQEVEFEQGIEMINIFKNYESH
SSILDDFYFYEERQKAMQERKARQLTSLVASDDLVCEASNLVSLPNDIVKKMSKSFAEVL
LLNENEQAGGGTGKVLSAACGGHGR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggctcaccaaacttctgatcgaatgacctctactgactcggcagaggttttc
aacgttatggttctggatagcaacatcctttctaacccgaacgctttgactaataaggat
ttgatagctgttggttccttgagggatggttcatcccatcagtcgggattcatgccatct
gttgttgagtccacgacaacctatttgccgaatgcctattctcctgaggcacagttccat
caagaagttcataaacagagttcattgcttccatatgttaatgctgagggtttggacaat
ggttttcatgacatttacaatgaaactgcatctcttgggtttcatggtcttgggcatagt
ccacaaatgcaacaaagagcttatgctccggtttcatcttatctgcctcctgttggggat
cctatcgggctgtccaatgcaaggcatttcatcaccatagattcatcttatcaccagcca
tcagtttcccgaaatattccacatgttacttcaaaggcccagttttctcatttagagtgt
cctgtaaatattgagcaacaattggttggaaaaagatttgggctgggaaccaattacctt
cctcagtcaggatcatttgatggaggaagaaacttctttggaagctccagcagtctttgc
tcttcataccaagggtctgatggttttgcggttggtggattctgctcagactggtcaaag
ccttttagtgggaagagttctctgtttcgtccctcatatgcaccagcttctccaaaacgg
gttggttcactagagttttcttcaaacgaccctgcaatggtttcttttcaaaaagggcca
tttaatgggtttggttgtactagctccagctctagaggctacagtggtagcaaaagtgat
caacgttcttgtcatggcagtgtctctactaatagtttaggaataagtggtcataactgg
cctacgcttgctgaagcaagacaaggagggagctgcaatgacttctcctgcagttgtact
gtaacgcttgatacactaagtgagcgtaataggggacctagggcatttaagccgaaaaca
cagataactacgaagggttttattgttgatagcagcaagaatggcacaattaatggcatt
accaatggatcctacaaccgacagaattttgtcactgattatgagggtgccaagttcttt
gtgataaaatcttatagtgaagataatgttcacaagagcattaagtatggtgtctgggca
agcactcctattggcaacaaaaaattagatactgcttatcatgaggcaaaagctaaacaa
ggaacatgccctgtctttctcttattttcggtcaatgctagcgctcagttttgtggagtg
gctgagatggtgggacctgttgactttgataaaagtgtggattattggcttcagaataag
tggtctgggcaattccctgtaaagtggcacattattaaagatgtccccaatagtcagttc
cgccacattctactagaaagtaatgacaacaagcctgttactaacagtagagatactcaa
gaggtggagtttgaacagggcattgagatgataaacattttcaagaattatgaaagtcat
tcttcaatccttgatgacttttatttttacgaagagcggcaaaaagcaatgcaggaaagg
aaggccaggcagctaaccagcctagtggcttccgatgatttagtgtgtgaagcatcaaac
ctcgtctcactccctaatgatatcgtgaagaaaatgtccaagagctttgcagaagttctt
ttgttaaacgagaatgagcaagcaggcggaggaactggaaaggtgctctctgctgcctgt
ggaggccatggtagatag
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