Gossypium hirsutum (upland cotton): 107916625
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Entry
107916625 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107916625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107916625
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107916625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_3
RRM_5
RRM_Nup35
SET_assoc
RBD_RDR6
RRM_fung
Motif
Other DBs
NCBI-GeneID:
107916625
NCBI-ProteinID:
XP_040955507
LinkDB
All DBs
Position
D08:complement(4071464..4074547)
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AA seq
244 aa
AA seq
DB search
MRPVFVGNFEFETRQSELERLFSKYGRIDRVDMKSGFAFVYFEDERDAEDAIRGLDNSAF
GYDRRRLSVEWAKGERGRHRDGSRSTTNQRRTKTLFVINFDPIRTRERDILKHFEPYGKV
LNVRIRRNFAFVQFATQEDASKALEATQRSKLLDRVVSVEYALRDDDERDGRYDSPRRGG
NGRHGDSPYRRSPSPAYRRRPSPDYGRARSPVYDRYNGSAYDRHKSPEYGRYRSSRSPVR
RSRT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgtttttgtggggaatttcgagttcgagactcggcagtcagaactggagcgt
ttgttttccaagtatgggaggatcgaccgagttgatatgaaatctgggtttgctttcgtt
tattttgaggatgaacgtgatgctgaagatgctattcgtggacttgataatagtgctttt
ggatatgatcggcggcgactgtccgtggagtgggcaaagggagaacgtggtaggcatcgt
gatggatctagatcaacaacaaatcaaaggcgcaccaaaaccttgtttgttatcaacttt
gacccgattcgcaccagggaaagagatatactgaagcactttgagccatatgggaaggtt
cttaatgttcgcattaggcggaactttgcatttgtgcaatttgccacacaagaggatgca
agcaaagcccttgaggctacacaaagaagcaagttactggatcgagttgtgtcagttgaa
tatgctttaagggatgatgatgagagggatggtagatacgatagtcccagaagaggaggt
aatggcagacatggggatagtccatatcggaggtctccaagccctgcatatcgaaggcga
ccaagtcctgattatggtagggctcggagtcctgtttatgatcgctataacggttctgct
tatgacaggcacaagagtcccgagtatgggagatatcgcagcagccgatcccctgttcga
aggtcccggacatga
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