Gossypium hirsutum (upland cotton): 107916650
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Entry
107916650 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107916650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107916650
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107916650
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107916650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
107916650
NCBI-ProteinID:
XP_016701459
UniProt:
A0A1U8KL74
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All DBs
Position
D11:complement(18012541..18015661)
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AA seq
344 aa
AA seq
DB search
MAKFSVGIDEDGEGPSNRVPKRQRAERVLDIEGSGQEESEQGEEDEESEGEEASEGEEEA
SEESEGEEELEESGAEQGAMSPQTSRDGSISITLTDPEVLDCSICYEALTIPVFQCENGH
IACSTCCIKMRNRCPSCMTPIGYSRCRAIEKVLESVKVTCQNTKYGCKEAFSYSMKQKHG
KACLFAPCSCPLPDCDFEGSSEELSAHFGNVHKYSATRFLYDRLAPITLGVSEKFLILRE
ETDGSLFILHNKVENLGNVVTLSRIGPSTERGFFYELTVKAPSDVSNLRLQSFTKSTPKR
VDSPQSLGFLLVPSQFSCISRQIKMDLRLGRSDRFSYYQRPGGA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttctctgtggggatcgacgaagacggagaagggccaagcaatcgagtccct
aagcgtcaaagggcggagcgtgttcttgatatcgaaggctctggtcaagaagaatccgag
caaggggaagaagacgaagaatctgaaggcgaagaagcatccgaaggagaagaagaagct
tccgaagaatctgaaggagaagaagaattggaggaaagtggagctgagcaaggagcaatg
agccctcagacttctcgagatggatccatttctatcacgttaactgaccctgaagttctt
gattgttctatctgttatgaggccttgactatccctgtttttcagtgtgagaatgggcat
atagcttgctctacctgttgcatcaaaatgaggaatagatgtccatcctgtatgactcca
atcggctatagtcgctgcagggcgattgagaaggtgttggaatctgtcaaagtgacatgc
caaaacacaaagtacgggtgcaaagaagcattcagttatagcatgaagcagaaacatgga
aaggcatgccttttcgcgccatgttcatgcccccttcctgattgcgactttgagggttca
tcagaggagttaagtgcacactttggcaatgtacacaagtattctgcaacacgtttcctt
tatgatcgtctagcacccattaccttaggagtttctgagaaattccttattcttcgagag
gagacagatggttctttgttcattcttcacaacaaggttgagaatttggggaatgtagtt
actttgagccggattgggccctcaacggagagaggtttcttctatgaactaactgtgaaa
gctccatctgatgtaagtaatcttagattacagtccttcacaaagagcactccaaaacga
gttgatagcccacagtcattagggtttctcctggttccaagtcagttctcatgcatttcg
cggcagatcaagatggacctccgcctggggcgttctgatcggttttcctactaccagaga
cctggtggtgcataa
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