Gossypium hirsutum (upland cotton): 107916688
Help
Entry
107916688 CDS
T04793
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107916688
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107916688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DUF3658
DASH_Spc34
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
107916688
NCBI-ProteinID:
XP_016701515
UniProt:
A0A1U8KGC2
LinkDB
All DBs
Position
D11:18757584..18763767
Genome browser
AA seq
737 aa
AA seq
DB search
MFTTLLKSPIPFSSSFNSTQNPSKTQKGNHSFNKNSKFSVSKTHRNGPIKMPTPPWMKGP
LLLQPDEVLNASKPTTKRSSNNNSKAPENALFGKESGVRGKKVMKKIIRDVEKLQGNGVL
DDNQIGKFEEFEIGNWLEEIGSDGEVKKFDRKMPWVREEEKVVFRRMKKEKVLTQAEIIL
DNDLLERLRKKAMRMRKWVKVMKAGVTQAVVDEIRLVWRNNELVMLKFGVPLCRNMDRAS
EIVEMKTGGLVVWCKKDVLVVYRGQNHWLTSNGRRVFNNLVSDNNTTMSQEKSNASTWGR
SLNGEDRDENNQPVVGSLYERETDRLLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFRPP
ARLSPPKTRPKLTDEELTNLRKLAHPLPFHFALGRNRNLQGLANAILKLWEKSLIAKIAI
KWGAQNTDNEQMANELKDLTGGVLLLRNKFLIIFYRGKDFLPQGVANSVMEREMALRRCQ
LIEEDARVKVAETFQVANEPLAKTSTVGTLAEFQDIQTKYGVLEKENNELEIQIEAQKEN
LERELRNQERKLAILNGKIEKSATKLAKLNSSWQTAEPDLDLETITEEERECLRKIGLKL
SSCLLLGRRGVFNGVIEGVHQHWKHREVVKVITMQRAFLRVIYTAKMLVAESGGILVSVE
KLKEGHAIIIYRGKNYRRPSKLMTDHLLTKREALQRSIELQRIGSLKFFAYQRRQAILDL
KLKLAKLEEQGVASPQG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccactctcttaaaatctcccattcctttctcttcttccttcaactcaacccaa
aacccttccaaaacccagaaaggaaatcactctttcaacaaaaattccaaattctcagtc
tcaaaaacccacaggaatggccccattaagatgcctacacctccatggatgaagggtcct
ctccttctccaacccgatgaagtgctaaatgcttcaaaacccactactaaaaggagctca
aacaacaattcaaaggcacctgaaaatgcattgtttggaaaggaaagcggggtgagaggg
aagaaagtgatgaaaaagatcatcagagacgtggaaaagctacaagggaatggagtttta
gacgataaccagattgggaaatttgaagaatttgagatcgggaattggttggaggaaatt
ggaagtgatggggaagtgaaaaaatttgataggaaaatgccgtgggtgagagaagaagag
aaagttgtgtttaggaggatgaaaaaggagaaagttttgacacaggctgagattattctt
gataacgatttgcttgagagactgagaaaaaaggctatgaggatgaggaaatgggttaag
gtgatgaaagctggtgtaactcaggctgttgttgatgagataaggttggtttggaggaac
aatgagcttgttatgcttaaatttggtgttcctttgtgtagaaatatggatagagcaagt
gaaattgttgagatgaagactgggggcttggttgtatggtgcaagaaagatgttcttgtt
gtttatagaggacagaaccactggctgacttcaaatggtcgaagagtattcaataacttg
gtctcagacaataatactactatgtctcaagaaaaatctaatgcaagtacttgggggaga
agtttgaatggagaagacagagatgagaataaccaaccagtagttggatcactgtatgag
agggaaactgatagattattggatggtttaggacctcgctttattgactggtggatgcga
aagccattaccagttgatgctgacttgcttccagaagtggttcctggctttaggcctcca
gcaagactttctcctcctaaaactagaccaaaattgacagatgaggagttgacgaatttg
aggaagctcgctcatcctttaccttttcactttgctcttgggaggaataggaaccttcaa
ggcttggctaatgctatcttgaaattatgggaaaagagtctcatagcaaagattgctata
aagtggggggcacaaaatactgacaatgagcaaatggctaatgagctcaaggatctcacg
gggggagttttgttactaaggaataagttccttataatattctaccgggggaaggacttc
cttcctcaaggtgttgctaattctgtaatggagagagaaatggcactcaggagatgccaa
cttattgaagaagatgctcgagtcaaagtagctgaaacctttcaggttgctaatgaacct
ttggcgaagactagcactgtaggaactttagcagaatttcaggatattcagaccaaatat
ggagtcctggaaaaagaaaataatgaactcgaaattcaaatagaagctcaaaaggaaaac
ttagagagggaattgagaaaccaagaacgcaaacttgcaattctcaatggaaagatagag
aagtcagctacaaagctagcaaagttgaattcttcatggcaaactgctgagccagatttg
gatctcgaaaccattactgaagaggagagagaatgcttgcggaagatcggactgaagcta
agtagttgcttattgcttggtaggcgtggggtctttaatggcgtcatagaaggagtacat
caacactggaagcacagagaagttgtcaaggtaatcacaatgcagagagcgttcctacga
gttatctatactgcaaaaatgcttgtagcggagagtggtgggattttggtttcagtggag
aagctaaaagaaggtcatgccataatcatctaccgaggaaaaaactatcgacgcccttcg
aagctaatgactgatcatctcctaactaagagggaagcattacaaaggtctattgaatta
cagagaatcggatcattgaagttttttgcatatcagcgacgacaggcaatcttagatttg
aaactcaaactggccaagttggaggaacaaggagttgctagtccacaagggtga
DBGET
integrated database retrieval system
