Gossypium hirsutum (upland cotton): 107916695
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Entry
107916695 CDS
T04793
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X3
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107916695
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107916695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
ORC6_2nd
Zn_Ribbon_TF
HD_4
BRF2-like_C_cyclin_rpt
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
107916695
NCBI-ProteinID:
XP_016701522
UniProt:
A0A1U8KGH7
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Position
D11:complement(18808004..18817456)
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AA seq
597 aa
AA seq
DB search
MVYCNNCSRNVTGERVDDGLLSCTFCGKVLEDCIFATEPQFVKDSSGQSKLSGNFVKSTQ
SISDSRQHTIAKALDGIRSLKTGLLIDEYSDDVANVALRFYEVGLERNFTKGRRSELVQA
ACLYLACRQKGKPFLLIDFSHYLHVNVYELGSVYLQLCYVLYLADSKDLPKLIDPSIFIH
KFTNALIPEGNDEVVKTARDILASMKRDWMQTGRKPSGLCGAALYISALSHGLKFSKSKI
IEVVHICEATLSKRLIEFENTDSGALTMEEFTEKERELRTSSLTEKHPNIGSKETSLDEV
LCRHVGRKPFAYGLCNECYEEFMKVSGGIDGGSDPPAFQRAEKERMAKLSIEENNKSISS
STFASGSEIPENSGFLEDATNKAAIGEGDNDKLPGVDDSDDGSDNFSDIDDIEVDGYLHN
EEEKHFKKIIWEEMNREYVEEQAAKEAAAAAAKEACMANYDKCPEDLQAAQKLAADVAEL
VAKSRKERQQKRAAEEKDAGPAQTAAEATRRMLVRKRLSSKINYDALEKLFDDPVTEKPK
KQRIESNSDEKEEKASKIGKEGDLEDEYNDNDDDGYGGIFYGDTEYEYEDNYDYDGY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtttactgtaataattgctccagaaacgttactggagaacgcgtcgacgacggtctt
ttgtcttgcactttttgcgggaaggtgttggaagattgcatttttgcaaccgaacctcaa
ttcgttaaagattcatctggccaaagcaaactatctggaaattttgtgaaatctacgcaa
agcatttcagattcacgccagcataccatagctaaagctcttgatggtatcagatctttg
aagactggattgcttattgacgagtatagtgatgatgttgctaatgttgctttacggttt
tatgaagttggccttgaacggaatttcactaagggacgcagatcagagctagtacaggct
gcatgtctttaccttgcctgtcggcaaaagggaaagccattccttcttattgatttttca
cattatttacatgtaaatgtttatgagcttggctctgtatatctgcaactttgctatgtg
ctgtaccttgctgactcaaaggatcttccgaaactaattgatccttcaatttttattcat
aaatttacaaatgctttgattccagaaggaaatgatgaagttgttaaaactgcacgggac
attttagctagcatgaaacgggactggatgcagacagggcggaaacccagtggattatgt
ggtgcagcactgtacatttctgcactttcacatggtctgaagttttctaagtcaaagatt
atagaggttgttcacatttgtgaagcaacattgtcaaagcggttgattgaatttgagaat
accgactctggagccttaacgatggaggaatttacggaaaaggagagggagcttcgaact
agttcattaactgaaaaacacccaaatattgggtcaaaagaaaccagcttagatgaagtg
ctatgtaggcatgtggggagaaaaccttttgcctatggactttgtaatgaatgttatgaa
gagttcatgaaggtttcaggagggattgatggagggtcagatccacctgcattccaacgg
gctgagaaagagagaatggcaaaattatctattgaggaaaataataaaagcatatctagc
agcacgtttgcaagtggatctgaaatacctgaaaatagtgggtttttagaggatgcaact
aacaaggcagccattggtgagggtgacaatgataagttacctggagttgatgatagtgat
gatggatcggataacttttctgatattgatgatattgaggttgatggttaccttcacaat
gaggaggagaagcatttcaaaaagatcatttgggaagaaatgaaccgggaatatgttgag
gaacaagcagccaaggaagcagctgcagcagcagctaaggaggcttgcatggccaactat
gataaatgcccagaggatctccaagctgcacagaagcttgctgcagatgttgcagaacta
gtggcaaaatctagaaaggagaggcaacaaaagcgagctgctgaagaaaaagatgcaggt
cctgctcagactgctgccgaggcaacccggcgaatgctggttaggaagagattaagttca
aaaataaactatgatgcattggagaagctctttgatgacccggttacagagaaacccaag
aaacaaagaatagaatcaaattcagatgaaaaggaggagaaggcttctaaaattggcaaa
gaaggtgatttagaagatgaatataacgacaatgatgatgatggatatggaggaattttt
tacggtgacactgaatatgagtatgaggataattatgattacgatggatattga
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