Gossypium hirsutum (upland cotton): 107916821
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Entry
107916821 CDS
T04793
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107916821
04121 Ubiquitin system [BR:
ghi04121
]
107916821
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107916821
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107916821
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107916821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Zn_ribbon_RPAB4
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
DUF7129
Motif
Other DBs
NCBI-GeneID:
107916821
NCBI-ProteinID:
XP_040965829
UniProt:
A0ABM3BFJ2
LinkDB
All DBs
Position
D13:complement(1873710..1875269)
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AA seq
362 aa
AA seq
DB search
MAATTSYWCYQCNQFFLISNEDPITCPDCDGGFIEEIENMPHAARALHADSRLVGGDGFT
AMYNSSTTLRRSRMNGGDRSPFNPVIVLASPSGESTNVEQSGRGFELYYDDGGGLGLRPL
PASMSEFLLGPGFDRLIEQLSQMEIHNIGRHNQPPASKAAVEAMPMVEIDDTHIHNELFC
AVCKEQFELGTKVLNMPCNHLYHSNCLLPWLRLRNSCPVCRHELPAAKGEEGDGSSNSLD
ETPMGLTIWRLQGGGFAVGRFSAGENREFPVVYTEMDGGFSGGGLVPRRVSWGSGGRERG
GYLRRVLRNMFGCFSGSSSSPRLDSRIRRSSRSFSLFSPPSRRRGWALELDNARSRSRRR
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacgacgtcgtattggtgttaccaatgcaatcagttcttcttgatttccaac
gaagatccgattacttgccccgactgtgacggcggattcatcgaagagatcgaaaacatg
cctcatgcagcgcgtgctctccacgctgactcccgtctcgtcggcggcgatggattcacc
gcgatgtacaatagctcaactacccttcgtcgaagccggatgaacggtggcgatcgttct
ccttttaatcccgtcatcgtcttggcgtcaccttccggggaaagtacaaatgttgaacag
agtgggagggggtttgagctttattatgacgacggaggtggattgggtttgcggccttta
ccggcgagcatgtcggagtttctgttaggtcctgggtttgaccggttaattgagcagtta
tcacaaatggaaatccacaacattgggcgtcacaaccaaccgccggcgtcgaaagcggcg
gttgaggcaatgccaatggtggaaatagacgatacccatatccataacgaactgttctgt
gcggtatgcaaagaacaattcgagttaggaaccaaagttttaaacatgccttgtaaccat
ttgtaccattcaaactgtttactcccttggcttcggttgcgaaattcatgccccgtttgc
cgccatgaattgccggcagctaaaggggaagaaggggacgggagttcaaattcattggat
gagacccccatggggttgaccatttggagattacagggtggtgggttcgcggtggggagg
ttttcagctggagagaatagagagtttcccgttgtttatacggaaatggatggtggtttt
agcggcggagggttggtgccgcggagggtttcatgggggagtggagggagggaaagagga
gggtatcttagaagggtgttgcggaatatgtttgggtgttttagtggttcaagttcttct
cctaggttggattcaaggataaggagaagtagtagatcattttccctttttagtcctcct
tcaaggagaagaggttgggctcttgaacttgataatgcaagatctagaagtaggagaaga
agaaggtaa
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integrated database retrieval system
