KEGG   Gossypium hirsutum (upland cotton): 107916823
Entry
107916823         CDS       T04793                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107916823
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107916823
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 107916823
NCBI-ProteinID: XP_016701689
UniProt: A0A1U8KLT9
LinkDB
Position
D08:complement(4364665..4372214)
AA seq 624 aa
MASTESSRSSTAGSPDSYIGSLISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGR
KKDGPQVPASDKIYEYILFRGSDIKDLQVKSSPPPVQTPAPIHNDPAIIQSHYPQSAIAS
TSLPSSGSGSMQDMGSQTSSIGLTRPPFQGNLPLYQPGANLGPWGSSGAPTANSGLSIPM
YWQGYYGSANGLPPQQQPLLQPPPGLSMPSSMQQPMQYPAMNASLPAAASNLPGSQLPES
TPLLLPPFGTGTLNLQSSGPPAQSSNLASDSLTSLNQDRASSLTLPTAAPSSSLPLVPPS
NTALDKTAVMLPFSEKTKTVPDPVMPFKGMPDSASSTIGTTSSVLNDGMLPSLVTPGQLL
QPGLVPASLSMSSQTAQKDVEVVHVSSPELTTSAPALAPVPAKASQPVLAQAPQSLSAQA
VPPLLAQAPQQPSKTEGQEPILPSPSPSDHKLHGAPMHAHQFHNYRGGRERGRGRGRGRG
NEISRSATKFTEEFDFTAMNEKFNKDEVWGHLGRSSRAKEDADDLQNEDSVESSQVEVKP
VYVKDDFFDSLSCDSLGGGSRNGRTRFSEQMRRDTETFGDFPRHRGGRGGRGPFHGGRAR
GSYYGRGYGYGGRGRGYGTENRTN
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggcctcaaccgagagttccagatcttcaactgctggctctcccgattcatacataggc
agcttgataagcttgacgtccaagtctgaaatcagatatgaaggtgttctgtttaatatc
aacactgaagaatccagcatcggcttgagaaatgtaaggtcatttggaactgaagggcgg
aaaaaagatggtccacaagtgccagcaagtgataaaatttatgaatatatactgttccgt
ggaagtgacatcaaggacttgcaggttaaatcttcgccaccaccagttcagactccggca
cctatacacaatgatcctgctattatacagtctcactatccccaatcagcaattgcatcc
accagcttgccttcttctggttcaggatctatgcaagatatgggttcccaaacttcgtct
ataggactgacgaggccaccatttcaaggcaatcttccattatatcaacctggtgcaaat
ttagggccatggggttcatcaggtgctccaaccgcaaatagtgggctctccataccaatg
tactggcagggttactatgggtccgcaaatggtcttcctccacagcagcaacctttgctt
caacccccacctggcttgtcaatgccatcttccatgcagcaacctatgcaatatccagcc
atgaatgcgtctttaccagctgcagcttctaatttgccaggttctcagttacctgaaagc
actccccttttgctgccaccctttggtacaggcacactgaatttgcaatcttctggtcct
ccagcacagtcttctaatttagcttcggactcattaactagtttgaatcaagatagggct
tcttctttaactcttcctactgcagctccaagtagtagcttgccactggtacctccatca
aatactgctttagataaaactgctgtcatgttgcccttttctgaaaaaactaagacagtt
cctgatcctgtaatgccattcaaaggcatgcctgattctgcttcctccaccattgggaca
acaagttcagttttaaatgatgggatgcttccttcgttagtaaccccaggccagctttta
caaccaggactggtcccagcatctttgtctatgtcttcacaaacagctcagaaggatgtg
gaagttgttcatgtgtcatctccagaactgacaacatcagcccctgcactagcacctgtg
cctgcaaaagcatcacaacctgtgttagcacaagcaccgcaatcattgtcagcacaagca
gtgccaccattattagcacaagcaccacaacaaccatcaaaaacagaaggacaggaacct
atattgccttcgccttcaccctctgatcataagctacatggagctccaatgcatgctcat
caatttcataattatagaggtggccgtgaaagaggacgaggaagaggaagaggaagagga
aatgagatttcacgttcggcaaccaaatttacagaagaatttgacttcacggcaatgaac
gagaagtttaacaaggatgaagtttggggtcatcttggaagaagtagccgagctaaggaa
gatgctgatgatttacaaaatgaagatagtgttgaatcctcgcaagttgaggttaagcct
gtatatgtcaaggatgacttttttgattccttgtcctgtgattctcttggaggtgggtca
cggaatgggaggactagattttcagagcaaatgaggagggatacagagacctttggcgat
ttcccaaggcatcgtggcggtagaggtggccggggacctttccatggtggtcgagctaga
ggttcttattacggaagaggctatggttatggtggaagaggtaggggatacggcacggaa
aatcgtaccaactag

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