KEGG   Gossypium hirsutum (upland cotton): 107916920
Entry
107916920         CDS       T04793                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00900  Terpenoid backbone biosynthesis
ghi01100  Metabolic pathways
ghi01110  Biosynthesis of secondary metabolites
Module
ghi_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    107916920
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ghi01006]
    107916920
Enzymes [BR:ghi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     107916920
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     107916920
    2.5.1.29  geranylgeranyl diphosphate synthase
     107916920
Prenyltransferases [BR:ghi01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   107916920
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 107916920
NCBI-ProteinID: XP_016701785
UniProt: A0A1U8KH52
LinkDB
Position
A01:complement(11787312..11788502)
AA seq 295 aa
MARALSHIHGSPVFHVPYTPIPTRQFPSQLPCRLFKVTMSSNQSYWTTINADIETHLKQA
IPVREPLSVFEPMNHLTFSAPRSTAPALCVAACELVGGHRDQALPAASALQLMYAASFAH
EHLPLTQSSRPKSEIQHLYGPNIELLTGDAMIPFGLELLAVSDDPTQKNSDRVLRVMVEI
TRAIGSQGMVHGQYYEVEPYESSNIRQNERVSEKYEGTLHGCAAACGAILAGGSEVEIEK
MRRYGLYIGKIQGMIRRDERNSKDLKELVEETRKLATNELRGFNEAKVEAISKLF
NT seq 888 nt   +upstreamnt  +downstreamnt
atggccagagctctctcccacatccatggcagcccagtattccatgttccttacacaccg
attcccacacgtcaatttccttcccaattgccttgtaggcttttcaaagtcaccatgtca
agcaaccaatcttattggaccaccataaacgctgacattgaaactcatctcaagcaagcc
ataccggtacgagaacccctctctgttttcgaacccatgaaccatttgacgttttccgcc
ccacggagcactgctcctgcattatgcgtggccgcctgcgagcttgtcgggggtcaccgg
gaccaagctttgcccgcggcatcagcacttcagctcatgtatgcagcttccttcgctcac
gaacaccttcccttgacccaaagctctaggcccaaatccgagatccaacatctctacggt
ccaaacattgagttactcaccggggacgcaatgataccattcgggctcgagctgttggcc
gtatcggatgatccgactcaaaagaattcggatcgagtattacgtgtaatggtcgagatc
acacgtgctataggctcacagggcatggttcatggacaatattacgaagtggaaccttat
gaatcaagcaatatcagacaaaacgaacgtgttagcgaaaaatacgaaggcacattacac
ggttgcgcggccgcgtgtggcgcgatattagcaggcggaagtgaagtggagatagagaaa
atgagaaggtacggtctatacataggaaaaatacaaggaatgataagaagagatgaaaga
aacagcaaagatttgaaggaattggtggaggagactagaaaattagccaccaatgaattg
agaggtttcaatgaggcaaaggttgaagcaatatctaagttattttga

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