Gossypium hirsutum (upland cotton): 107916968
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Entry
107916968 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107916968
KO
K14315
nucleoporin NDC1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107916968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107916968
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107916968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
107916968
NCBI-ProteinID:
XP_016701840
UniProt:
A0A1U8KLI2
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Position
D08:4595042..4600162
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AA seq
492 aa
AA seq
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MCSWTAAESDMVVKNRLVGFLLWQSILSSLIFLAFTITIVSWRSATAIFVSFFSFHLSQL
LFSVSLSTVLSPQPKFRRILPVLLTDAAVSGSLSAVSFCGFNGRVGFKGFASGLFYASFY
VYKRRWVLQFPIIQRPLFFSFKMGIPSAIIRALKLSAAAYLFSVLLLVFLPHHFSTDLKL
GNFFTQHIISYAACFSMFLCWELTHHLHQVLHTKRFIFAPPKGSAAAETNPSEPLLATLE
ECSPASPLKYLAYLDLCMVCENNVDYWRRAAFFEETGETYKRVAAVCLRPLEQLASKLVQ
GFECSSDDKIFSISDQLQSPTNPRQNSKCHELVNDFQVYTWSARALASLTSRSRKEDRFG
VAQLSGSNAAAISTLIACLLAVETLMGKKISLQPSHQLMGAFSTKSATFSTGRRDVRTGK
RRDDPLYSKAYAMADVLRTSIYGIVSAFHHEMLNSAKAGLLEKDWITSSKPPFGTRELLL
QKLHLFLDFQAS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcatggactgcagctgaatcagacatggtagtgaagaaccggttggtagggttc
ctactatggcaatcgatcctaagtagcttgattttcttggccttcactataacgatcgtc
tcctggcgctccgccactgcaatcttcgtctcctttttcagctttcatctgtcccagctg
ttgttctctgtgtccctctctaccgtcttatctccccaacctaaatttagacgtattttg
ccggtgttgctgacggacgccgctgtttcgggttctctctcagctgtgtctttttgtggg
ttcaatggaagagtggggtttaagggttttgcttccgggttattctacgcttctttttat
gtttataagcggcgatgggtattgcagttccccatcattcagcgtccccttttctttagc
ttcaagatggggatcccttccgccattattagagcactgaagctttctgctgcagcttat
ctattttcagttctgctgttggtatttctgccacaccattttagcactgatctcaagctc
gggaacttttttactcaacacataatctcctatgctgcctgcttttctatgtttctctgt
tgggagttaactcaccatttgcatcaggtgctacatactaaaaggttcatatttgcacca
ccaaaaggatcagctgcagcagaaacaaatccaagtgagcctctcctagctacattagag
gagtgctctccagcttctcctctgaaatatcttgcataccttgatctatgtatggtttgt
gagaataatgttgactactggcgtcgagctgccttctttgaagaaactggtgagacttac
aaaagagttgcagctgtatgtttgagacctttggagcagcttgcatcaaagttggtccaa
ggttttgaatgttcttcagatgataaaatcttctcaatatctgatcagttgcagtcacca
actaacccccgacagaattcaaaatgccacgagctagtgaatgacttccaggtatacaca
tggtctgctcgagcacttgcttccttaacttcacgctcacgtaaagaagaccgatttgga
gttgctcaactatctggtagcaatgctgctgccatctcaacactcatagcttgtttactt
gctgttgaaacattgatggggaaaaaaataagcttacaaccatctcatcagttaatggga
gcattcagcacgaaatcggctaccttcagtaccggaagaagagatgttaggacaggaaaa
aggagagatgacccactatattctaaagcatacgcaatggctgatgttttaaggacttca
atttacggcattgtgtctgctttccaccatgagatgctgaatagtgccaaagcaggcctt
ctcgagaaggattggattactagtagcaaacctcctttcggaactcgtgagttgctgttg
cagaaattgcatcttttcctagacttccaagcaagttaa
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