Gossypium hirsutum (upland cotton): 107917064
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Entry
107917064 CDS
T04793
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03010
Ribosome
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107917064
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107917064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ghi03011
]
107917064
04121 Ubiquitin system [BR:
ghi04121
]
107917064
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107917064
Ribosome [BR:
ghi03011
]
Ribosomal proteins
Eukaryotes
Small subunit
107917064
Archaea
107917064
Ubiquitin system [BR:
ghi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107917064
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107917064
Exosomal proteins of colorectal cancer cells
107917064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
Fer2_3
DUF2604
UBL_UBAC1
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
107917064
NCBI-ProteinID:
XP_040955527
LinkDB
All DBs
Position
D08:4777391..4778175
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AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDESGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaacggggaagaccataaccctagaggtcgagtcttcc
gacacaatcgataatgtcaaagccaagatccaagacaaagaaggcatacccccggaccaa
caacgcctcatcttcgccggtaagcaactcgaagacggccgcaccttagctgactacaac
atccaaaaggaatccactctccaccttgttctccgtctcaggggtggcgccaagaagagg
aagaagaagacctacaccaagcctaagaagatcaagcacaagaagaagaaggtcaagctc
gccgtgctccagttctacaaggtcgatgaatccggcaaggttcagaggctgaggaaagag
tgccccaatgctgagtgtggggctggcactttcatggctaaccattttgataggcactat
tgcggtaagtgtggactcacttatgtttaccaaaaagctggtggcgattga
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