Gossypium hirsutum (upland cotton): 107917108
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Entry
107917108 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107917108
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107917108
NCBI-ProteinID:
XP_016701978
UniProt:
A0A1U8KLV6
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Position
D12:complement(2634976..2637344)
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AA seq
598 aa
AA seq
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MAVDSPLSSQLGPPACERDAKALHFIEETTSHADSVQDRVLTEILTRNSQTEYLTRFKLN
GATDRETFKSKLPIITYEDLQPEIHRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRRLLYSLLMPVMNLYVPGLERGKGLYFLFVKSETRTPGGLLARPVLTSYYKSD
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYAQMLCGLLQRQQVLRVGAVFASGLLRAIRF
LQLNWRQLTQDIETGALNPKLTDTSLREYMDKILKPNPELAECVRHECSKDNWEGIIARI
WQNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPMCKPSQVSYTI
MPNMAYFEFLPHEPDSFGFPCDSPPKLVDLVDVEVGKEYELVITTYAGLYRYRVGDILRV
TGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASRLLREFNTSVVEYTSYADTR
TIPGHYVIYWELLGKDSANSPTDEVLKQCCLAMEESLNSVYRQGRVADNSIGPLEIRVVK
NGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSSHFSPASPHWTPERRR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgattctcctctctcatctcagctgggtccaccagcatgcgagagagatgcc
aaagctttgcacttcatagaggaaaccactagccatgccgattcagttcaagacagagtc
ctgaccgaaatcttaacccgaaactcccagactgagtaccttacaaggttcaaactcaac
ggtgcaacagaccgtgaaacgttcaagtccaaacttccgatcattacatacgaggacctt
cagcctgaaatccaccgtattgctaatggtgaccgctctgccattttgtctgcccacccc
atctccgaatttctcaccagctccgggacttcagctggtgagagaaaattgatgccaaca
attaaggaagagctagatcgtcgccggttgctctacagtttactcatgcccgtaatgaat
ctttatgtgccgggattggagagaggcaagggactttacttcctattcgtaaagtctgaa
actaggaccccaggtggtctcttggctcgccctgtgttgaccagttactacaagagtgac
catttcaagacacgaccctatgacccttacaatgtttacaccagccccaacgaagccatc
ctatgtcccgattctttccaaagcatgtacgcccagatgctttgcggtctcctccaacgc
caacaagtccttcgagtgggcgcagtgttcgcctcaggtttactccgcgcaatcaggttc
cttcagctgaattggcgtcaactcacccaggatatcgaaacaggtgccttgaaccctaaa
ctcactgacacttcactaagggaatacatggataagatcctaaaacccaaccctgaactc
gctgagtgtgttcgccatgaatgttcgaaagacaactgggaaggaatcattgctagaatt
tggcaaaacaccaagtacctcgacgttatagttactggtgctatggcacagtatattcca
acgctggattattacagtggtgggttacctttagcttgcactatgtacgcttcgtccgaa
tgttattttggtttgaaccttaaccccatgtgtaagccatcacaagtttcttataccatc
atgccaaacatggcatacttcgagttcttaccccacgagcctgactcatttggtttccct
tgtgactcacctcctaaactcgttgaccttgttgatgtggaagttgggaaagaatacgag
cttgtaatcacaacctatgcagggttgtacagataccgagtcggtgacatcctccgagtc
actggattccacaactcagccccgcaattccattttgtgaggaggaagaacgtgttgctc
agcattgactcggacaaaaccgatgaggcggagttacaaaaggcagttgaaaatgcttcc
cgactcttgcgtgagttcaacaccagcgtcgttgaatacacgagttacgcggacacaagg
acaatccccggtcactacgtgatatactgggaattgttagggaaagactcagctaactcg
cctactgatgaggtcctgaaacagtgctgcttagcaatggaggagtctctcaactcagtg
taccgacaaggccgagttgcggataactcaataggtccactggaaatccgtgtggtaaaa
aacggcacattcgaagagttaatggattacgcaatatcaagaggggcatccatcaaccaa
tacaaggttccaaggtgtgttaacttcactccaatcatggagttgctcgattctagggtg
gtatcttcgcattttagcccagcgtcgccacattggaccccagaaagaaggagatga
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