Gossypium hirsutum (upland cotton): 107917216
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Entry
107917216 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107917216
KO
K03504
DNA polymerase delta subunit 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03030
DNA replication
ghi03410
Base excision repair
ghi03420
Nucleotide excision repair
ghi03430
Mismatch repair
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107917216
03410 Base excision repair
107917216
03420 Nucleotide excision repair
107917216
03430 Mismatch repair
107917216
03440 Homologous recombination
107917216
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107917216
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107917216
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107917216
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107917216
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107917216
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107917216
MMR (mismatch excision repair)
DNA polymerase delta complex
107917216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
107917216
NCBI-ProteinID:
XP_016702080
UniProt:
A0A1U8KHZ2
LinkDB
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Position
A01:complement(5389790..5393567)
Genome browser
AA seq
468 aa
AA seq
DB search
MTQIETLGILEEIQALVSDKLQVVSYKWLSRHFLVSSNVAKRLLAEFVEKHGSGLEVVYS
LSGWLKNSPSNYHIQLVSRHKLSEAKQEYDGNCRADVYSVQVCIPEDPAAIWNTEFLQAE
ELFKRPAPVDNCLRDNRFCGISASFVKRNVDGTTARVAAAQPDSAGTSGPSKQNSSQTNA
ALPSQQNKVLQSSSKVAQHTPIMVKDVKSDGIREVHNLAVKPSTDKKKTTSLPSNKNKDQ
NGKSSTGNEGSLATLWGRACTKPKSSSVPEVGCDSIQNFNGTADAQICAREAVEDENSDL
DAYEVNFRRASYGEGNKKRRVVFDFSDEDENEDAVNLASPDPPERKSLLGSEQDSKTLVP
ERPNSIVDKPNKDEVNIKEETMTDGEPNISLREETSLVSKRTNGRNSVVKLESQLPDTAP
NKMDEVTDAAPNSPKRSVDTIFWMKTGSTWILKKNENGSRHQSFFDEV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaattgaaaccctaggtattcttgaagagatccaagctctcgtctccgataaa
cttcaagtcgtatcctacaagtggttgagtcgtcattttctggtctcatccaacgttgca
aagagattgcttgctgagtttgttgaaaagcatggaagtggattagaagttgtatatagt
ttgtctggctggttgaagaactctccatcaaactatcatattcagcttgtatcaagacat
aaactttcagaagccaagcaagaatatgatggcaattgcagagctgatgtatacagtgtg
caagtttgcattccagaggacccagctgcaatttggaatactgaatttctacaagctgaa
gagctcttcaagcggcctgccccagtggataattgcttgagagataataggttctgtggg
atttcagcttcatttgtcaagcgcaatgttgatggaactactgcaagggttgctgctgca
caaccagatagtgcgggaacctcaggaccatccaaacagaattcttctcaaaccaacgca
gctttaccatctcaacaaaataaagttctgcaatcaagctcaaaagttgctcagcatact
cccattatggtaaaagatgtcaaaagcgatggtattcgtgaagtccataatctggccgtc
aagccttctactgataaaaagaaaactacttccttgccttctaataaaaacaaagatcag
aatggtaaaagctccactggaaatgaaggttcattagcaactttatggggtcgtgcatgt
acaaaaccaaagtccagttctgtgccagaagttggttgcgattccatccaaaatttcaat
ggaactgcagatgcacaaatttgtgctcgtgaagcagtagaagacgagaacagtgacctt
gacgcttatgaggttaatttcaggagagcttcttatggtgaaggcaataagaagcggagg
gtagtttttgatttctcagatgaagatgagaatgaagatgctgtcaatctagcttcacct
gatccccctgaaaggaaatcacttttaggttcagaacaagattctaaaactttggttcca
gagaggcccaattcaattgtagacaagccaaacaaggatgaagtaaatattaaggaagag
acaatgactgatggagaacccaatatatcattgagggaagaaacttcacttgtcagcaaa
cgcacaaatggtagaaattctgtggttaagcttgagagccagcttcctgacactgctcca
aataagatggatgaagtgactgatgctgcacccaattcacctaaaaggagtgttgacacc
attttttggatgaaaacggggtcgacttggattttaaaaaagaatgaaaacgggagtcgc
caccaatccttttttgacgaggtgtga
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