KEGG   Gossypium hirsutum (upland cotton): 107917602
Entry
107917602         CDS       T04793                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107917602
Enzymes [BR:ghi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     107917602
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 107917602
NCBI-ProteinID: XP_016702412
UniProt: A0A1U8KIY9
LinkDB
Position
A01:complement(6939867..6942064)
AA seq 454 aa
MEVTKVRFSFFFSFAALIPGLWANIAEFDDFWKQREEEAWNITLATYEPNPENVTNHLSY
NVNKFLKETSANQTIDFEDGITNNTRRYLRGKHKKYTGPCMATNPIDRCWRCKKNWAKNR
KRLAKCVLGFGHRTHGGSKGKYYLVTDNSDHDVLNPKLGTLRHAVIQKRPLWIIFARTMH
IKLSQELIVQSHKTIDGRGADVHIAYGAGITLQFVHNVIIHNIHIHRIVPSSGGLIRDSE
DHFGYRTVGDGDGISIFGSSNIWLDHISMSECHDGLIDAIQGSTAITISNCHFTHHDAVM
LLGASDSYSKDKFMQVTIAFNRFGKELLQRMPRCRWGFFHVVNNDYTHWKMYAIGGSMHP
TIISQGNRFIAPHDPNAKEVTNRLYASESEWKNWIWRSERDVLLNGATFRTSGPLSPPHL
KFNRKEMIKAKPGAYVRRLTRFAGTLNCIKRIKC
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaggtaactaaagtgaggttttcttttttcttttcgtttgccgcactaattccagga
ttatgggcaaatattgctgaatttgatgacttttggaagcaacgtgaggaagaagcttgg
aatattaccttggcaacttatgagccaaacccagaaaacgtcaccaatcatttgagctat
aatgttaacaagtttcttaaagaaactagtgccaaccaaaccatagattttgaggatggt
attactaacaacacgagaagatacttgagaggaaaacacaagaagtacactggtccgtgc
atggcgaccaatccaattgataggtgttggcggtgtaagaagaactgggccaaaaatcgt
aaaagattggcaaaatgtgtgcttggttttggccatagaactcatggtggaagtaagggg
aagtattatttggtgacagataattctgatcatgatgttctaaacccaaaactaggaacc
ttacgtcacgctgtgatccaaaaaaggccattatggatcatttttgctcgtaccatgcac
atcaaattgtcacaagagctaatagttcaaagtcataagacaatcgatggccgtggagca
gatgttcatatagcatatggagctggaattacacttcaatttgtgcacaatgtcatcatt
cacaacattcatatccatcgcattgttccaagttctggtggcctaatcagggactctgaa
gatcactttggttacagaacagtaggtgatggagatggaatttccatatttggatcatca
aatatttggcttgatcacatttctatgtctgagtgccatgatgggcttattgatgcaatc
cagggttcaactgccatcaccatttcaaattgccatttcacccatcacgacgctgtgatg
ttgttaggagcaagtgatagctattctaaagataaattcatgcaagtgacaatagcattc
aaccgttttggcaaggaattattacaaagaatgcctagatgtcgatggggtttctttcat
gttgttaacaatgactacacacattggaaaatgtatgctattggtggtagcatgcatccc
accattatcagccaaggtaacaggttcattgctccgcatgaccccaatgccaaagaggta
accaataggctctatgcatcagagtcagaatggaaaaattggatatggagatcagaaaga
gacgtactccttaatggagccacctttagaacttctgggccactctcgccaccccatttg
aaattcaacagaaaggaaatgatcaaagccaagcctggagcatatgtcagaagactcact
cgtttcgcagggactcttaactgtataaaaagaatcaaatgttag

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