Gossypium hirsutum (upland cotton): 107917701
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Entry
107917701 CDS
T04793
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107917701
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107917701
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107917701
NCBI-ProteinID:
XP_016702473
UniProt:
A0A1U8KN96
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Position
D01:complement(6237969..6240164)
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AA seq
454 aa
AA seq
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MEVTKVRFALFFSFAALIPGLWANIAEFDDFWKQREEEAWNITLATYEPNPENVTNHFNY
NVNKFLKETSANQTIDFEDGITNNTRRYLRGKHKKYTGPCMATNPIDRCWRCKKNWAKNR
KRLAKCVLGFGHRTHGGSKGKYYVVTDNSDHDVLNPKPGTLRHAVIQKRPLWIIFARTMH
IKLSQELIVQSHKTIDGRGADVHIAYGAGFTLQFVHNVIIHNIHIHRIVPSSGGLIRDSE
DHFGYRTVGDGDGISIFGSSNIWLDHISMSECHDGLIDAIQGSTAITISNCHFTHHDAVM
LLGASDSYSKDQFMQVTLAFNHFGKELLQRMPRCRWGFFHVVNNDYTHWKMYAIGGSMHP
TIISQGNRFIAPHDPNAKEVTYRLYASESEWKNWIWRSEGDVLLNGAIFRTSGPLSPPHL
KFNRKEMIKSKPGAYVRRLTRFAGTLNCKKRIKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaactaaggtgaggtttgctcttttcttttcgtttgccgcactaattccagga
ttatgggcaaatattgctgaatttgatgacttttggaagcaacgtgaggaagaagcatgg
aatattaccttggcaacttatgagccaaacccagaaaacgtcaccaatcatttcaactat
aacgttaacaagtttcttaaagaaactagtgccaaccaaaccatagattttgaggatggt
attactaacaacacgagaagatacttgagaggaaaacacaagaagtacactggtccgtgc
atggcgaccaatccaattgataggtgttggcggtgtaagaagaattgggccaaaaaccgt
aaacgattggcaaaatgtgtgcttggttttggccatagaactcatggtggaagtaagggg
aagtactatgtggtgacagataattctgatcatgatgttctaaacccaaaaccaggaacc
ttacgtcacgctgtgatccaaaaaaggccattgtggatcatttttgctcgtaccatgcac
atcaaattgtcacaagagctaattgttcaaagtcataagacaattgatggccgtggagca
gatgttcatatagcatatggagctggatttacacttcaatttgtgcacaatgtcatcatt
cacaacattcatatccatcgcattgttccaagttccggtggcctaatcagggactctgaa
gatcactttggttatagaacagtaggtgatggagatggaatttccatatttggatcatca
aatatttggcttgatcacatttctatgtctgagtgccatgatgggcttattgatgcaatc
cagggttctactgccatcaccatctcaaattgccatttcacccatcacgacgctgtgatg
ttgttaggagcaagtgatagctattctaaagatcaattcatgcaagtcacactagcattc
aaccattttggcaaggaattattacaaagaatgcctagatgtcgatggggtttctttcat
gttgttaacaatgactacacacattggaaaatgtatgctattggtggtagcatgcatccc
accattatcagccaaggtaacaggttcattgctccgcatgaccccaatgccaaagaggta
acttataggctctatgcatcagagtcagaatggaaaaattggatatggagatcagaagga
gacgtactccttaatggagccatctttagaacttctgggccactctcgccaccccatttg
aaattcaacagaaaggaaatgatcaaatccaagcctggagcatatgtcagaagactcact
cgtttcgcagggactcttaattgtaaaaaaagaatcaaatgttag
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