Gossypium hirsutum (upland cotton): 107917719
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Entry
107917719 CDS
T04793
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107917719
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107917719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
TPR_1
TPR_2
bL31_N
TPR_12
Motif
Other DBs
NCBI-GeneID:
107917719
NCBI-ProteinID:
XP_016702492
UniProt:
A0A1U8KJ70
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Position
D01:7753729..7762718
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AA seq
1253 aa
AA seq
DB search
MANYLAQFQTIKSTCNHLIIAVEDVSDLWPTVKNSFEERLPFKRSCLNNKTRNPVFVENL
PAEYILTTDARLRSRFPQEQYLFWFREPYATLVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSRAHPNNDQATKMAKKVYAKLEVDFSSKKRERCCKFDIYAPEANFWEDLEARI
MESVRNTLDRRIQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFMFEMAHLHEDALREY
DELELCYLETVNMGGKRREFGGLDHGDDQAALLIPGNKSLTQIVQDDSFREFEFRQYLFA
CQSKLLFKLNRPFEVASRGYSFVISFSKVLALHESILPFCMREVWVITACLALVNATNSQ
YKEGTATPEIEREFYRLQGDLYSLCRVKFLRLAYLIGYGTEIERSPVNSASLSMLPWPKP
AVWPLVPDEAASEVLLKEKMILQENPRVKHFGIQRKPLPLEPTALIREANRRRASLSAGN
TSEMFDGKLGFADGSGSDASSKTSPSSKAQAISMSRTYSTPGNFEGSIDRPMRLAEIFVA
AEHALKQTISNPDLLKTLSSIQDIEQKYMDLTKGAADNYHRSWWKRHGVVLDGEIAAVCF
KRGNFDLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLTSIVRLLSLDK
GLFSVKERQAFQSEVVSLAHSEMKHPVPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVW
SGFPDEITLDSLTLTLMATYNADEGGKLRSSSATVLKPGRNTITFPLPPQKPGSYVLGVL
TGHIGHLTFRSHSFSKAGPADSDDFMSYEKTTRPVLKVSKPRPLVDLSAAISSALLINEA
QWIGIIAQPINYSLKGAVMHIDTGPGLKIEESHSIEMETYINAAQISTDMANSGDARKDD
NENFEQLSLLDGKIEFPDWASNVTSILWIPIRAIDDKLARGSSSGAPQKQSIVDGMRTVA
LKLEFGISNNQIYDQTIALHFTNPFHVSTRVADQCNDGTLLLQVTLHSQVKATLTVNDAW
LDLQDGFVHAGQDDGRPVSGFFPLVISPTSRAGLLFRVCLGNGTALDENKAQPESILNIS
YRIAGDRTIGAHPPVAAKSNEIEGTSQDLIFRSALILQRPVLDPCLAVGFLPLPSDGLRV
GQLVTMKWRVERLKDIEESRVPQTNDDVLYEVNANSKNWMIAGRKRGHVSLSTKQGSRIF
ISILCMPLNAGYVHPPHLGLPDIDEANISCSPAGPHLVCVLPPALSSSFCIPA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactatctagctcagtttcaaacaatcaagagcacttgtaaccatcttatcatt
gctgttgaagatgtcagtgacttgtggcctactgtcaagaatagttttgaagagcggctt
ccattcaaaaggtcttgcttaaataacaagacccggaatcctgtgtttgtagagaatttg
ccagctgaatacatattaacaactgatgcaagactacgtagcagatttcctcaggagcaa
tatttattttggttccgagagccatatgcaactttggttcttgttacatgtgaggatctt
gatgagttcaagaccattcttaagccacgcctgaaattaattgtccaaaatgatgagcgt
gaatggtttattgtatttgtgtctagagcccatcccaataatgatcaggccactaaaatg
gcaaagaaagtatatgccaaacttgaagttgatttcagctccaagaagagggaaaggtgc
tgcaaatttgacatatatgcccctgaagcaaatttttgggaagacttagaggccaggatt
atggagtctgtcagaaatacattggataggcgtatacaattctatgaggatgagatacgc
aagcttagcgaacagcgtttcatgccaatttggaacttctgtaattttttcattttgaag
gaaagcttggcatttatgtttgagatggctcatcttcatgaggatgcgttgcgtgaatat
gatgaactagaattgtgctatttggaaacagttaatatgggcgggaaacgtagagaattc
ggaggactagaccatggtgatgatcaggcagcactgctcattcctggaaacaaatctcta
acacagattgtccaagatgactctttcagggaattcgaattcagacagtatctctttgct
tgtcaatcaaagcttttattcaagctgaatcgtccttttgaggttgcttcaaggggttat
tcatttgtaattagtttctcaaaagtcctggctttacatgagagtattttacctttctgt
atgcgtgaagtttgggtcatcactgcatgcttggctttagtcaatgcaaccaattctcaa
tataaagaagggactgcaacccctgaaatagaaagggagttctatcgccttcaaggtgat
ctttactcattatgtagggttaagttcttgaggcttgcgtatctaattggatatggaaca
gagatagaaaggagtcctgttaacagtgcttctttgagcatgctaccttggcccaagcca
gcagtttggcctttggttcctgatgaagctgcctctgaggtgcttctgaaagaaaagatg
attctgcaagaaaatcctagagtcaagcactttggcattcagaggaaacccttgccactt
gaacctactgcccttattcgggaggcaaatcggcggagggcttccctttctgctggaaac
acatctgagatgtttgatggcaaactaggctttgctgatggatcagggtcagatgcatct
tcaaagacttccccatcaagtaaagcacaagcaatttcgatgtctcgtacttactccact
cctggaaattttgagggctctattgatcgacccatgaggcttgctgaaatttttgttgct
gctgaacatgctctgaagcaaacaatttcaaatcctgatctgctgaaaactttgtcatcc
atacaggatattgagcaaaaatatatggatctcactaaaggtgctgctgacaattaccat
cgttcttggtggaaaaggcatggtgttgtccttgatggtgaaattgcagccgtttgcttt
aagcgtgggaactttgacctagctgcaaagtcatatgagaaggtttgcgctctttatgct
ggtgaagggtggcaagatttattggctgaagtactgccgaatttagctgaatgtcaaaag
atactcaatgaccaagctggctacctaacatctattgtacgattgctttcactagataaa
ggtttattctcagtgaaggaacgccaagcttttcagtcagaagttgttagtcttgcacat
agtgaaatgaagcaccctgttccgcttgatgtatcatcgttaattacattttctggaaat
cctgggcctcctttggagttatgtgatggggatcctggtaccttatctgtaacagtttgg
agtggctttcctgatgaaataactcttgattctcttactctcactttgatggctacgtat
aatgctgatgaaggtggtaagttaaggagctctagtgccactgttctaaagcctggtagg
aatacaatcacctttcctttaccacctcaaaaacctggttcgtatgtcctgggagttctt
actggacacattggacacttgacttttagatctcatagtttctccaaggcaggtccagca
gatagtgatgatttcatgagctatgagaaaacaacccggcctgtcttgaaggtttccaaa
ccaagacctctggttgatctatctgctgctatatcatctgccttgctgattaatgaagct
cagtggattggaattatagcgcaaccaataaactactccttgaaaggtgctgtcatgcat
attgatactggtccaggtctgaagattgaagagtcgcattccatcgagatggagacctac
ataaatgctgctcaaatttccactgatatggcaaactctggtgatgctaggaaagatgat
aatgaaaactttgagcagctaagtctcctcgatggtaaaatagagtttccagattgggcc
agtaatgtgacctcaattctttggattcctattcgtgctattgatgataagcttgcaagg
gggtcatcttcaggggccccgcagaaacaaagtatcgtggatggaatgcggacagtggct
ttgaaacttgagtttggaatatcaaacaaccagatctatgaccaaacaatagctttgcat
ttcaccaaccctttccatgtgagcacacgtgttgcagatcaatgcaatgatggtactttg
cttttgcaggtaacactgcactcccaggtgaaggccacattgactgtcaatgatgcttgg
cttgatcttcaagatggatttgttcatgctggacaagatgatggaagaccagtttccggc
tttttcccactcgtcatatctccaacttcaagagcaggactcctattccgtgtatgcttg
gggaatggaacagctctagatgaaaataaggctcaaccagagagcatattaaacatcagc
tatagaattgctggtgataggaccattggggcacacccacctgtggctgcaaaatcgaat
gaaattgagggtactagtcaggatttaatcttccggagtgctctaattttgcaacggcct
gttcttgatccatgcctggctgttgggtttctacctcttccttctgatggtctacgggtc
gggcaacttgttaccatgaaatggagggttgagaggttgaaagacatcgaggagagcagg
gttcctcaaaccaatgatgatgtgctatatgaagtgaatgcgaattccaaaaactggatg
atagccgggaggaaaagagggcatgtttctctctccaccaagcaaggttcaaggatattt
atttccatactatgcatgccactcaatgccggttatgtccacccccctcatctcgggcta
ccagatatcgatgaggcaaacataagctgcagtccagccggacctcaccttgtttgtgtc
ttgcctcctgcgcttagttcatccttctgcattccagcctga
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