Gossypium hirsutum (upland cotton): 107917809
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Entry
107917809 CDS
T04793
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X3
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107917809
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
Retriever complex
107917809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
107917809
NCBI-ProteinID:
XP_016702624
UniProt:
A0A1U8KPH6
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Position
A01:complement(12186225..12200328)
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AA seq
928 aa
AA seq
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MEFRPRNYVAEEQSHSLPRSRADIHPFSSSSPQSILRQVDDNEENRNNEEFFDPLRAPDS
NASVETVDGHDFESSSNGNDDSFPVQTKEWTSFKRFLMQRFPVSKMISVSSTFFFSQMSN
TIVRSGKAHEKSSSSTHLEELDDPQKFSETDTKVITQQEYVSRLHELKDEINRGWHSEDR
VKSLKLSIKVARLLMDTSVSNFYPTLFVLVTDVLNMLGDMVWERIRQKAEFAEDGARLCS
LRAENFRTSDVPIDAKETCYNWFCKVGSIRELLPRIYLELAIFPCWRFLIEQPVESLQRL
VMMTRGIGDPLASAYCRLYIAHRAQKLPSHDTGYLITCLNDITRIFTRISSTKESAHGCF
AGSKRSLVSLMEPSVEFIMKCILNDASQRRAGKVLVELGLGRSQEELFGGSPCVSIVLHH
LLKQLPIDIVSFHAVDILHLIKCSNDNSYDQCLNYRLVGLRLSEQISQIGSVEAVVNEVI
QVVSEYGLDEYLKVVDAYLDIVLQNQMDGHLKTILEGISKLASDKVLAEDELASLQSILV
KLLSHFKDLEHVFSLNHFLQILDTMHGNSRGIVNMHILDMATRNGYVHDPTTIQLLFEIS
QALHSDTDLVNMKNDDNQQQARLISRFVRMVDHGVEYERHLAFLMECRGALGSIVELKEI
LVHSSNCLATKALKDGKKHTAFVKTCMAFSEITIPSIPGHIKQLNLYLGTAEVALLGGLV
SHSDGLIDSAINCLQSSDWMEGSRTLDSDGMLSSIRKLCSLLIMVPGNPEVGILHIPKSI
LLIIHSRSWSPRLKARILCAIISLSATLSQERLPYHADHTEIMGNDLLFFGDSSYVCELL
SLTESVLQNLVDVIEQEPSRAARGSLSLEACNCIASSFKINEHVFSVCSKLIETAKLCLN
AKDKYLTSTISFLDKNLPAAAVSSSIAI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagacctcgaaactacgtcgcagaagagcagtcccactcgcttcctcgatca
cgcgccgatatccaccctttctcttcctcctctcctcagtcaatcctccgccaggttgat
gataacgaggaaaatagaaacaacgaggagttctttgatccgcttagagcacctgattct
aatgcatcggttgaaactgtcgacggacacgattttgagagtagttctaatggaaacgac
gattctttcccagttcaaacaaaggagtggacctcttttaagagattcttaatgcagaga
tttcctgtttccaaaatgatttcagtttcttctacattcttcttctcacagatgtccaat
acaatagtgagaagtggaaaagcacatgagaaatcttcaagtagcacacatctggaagaa
ctggatgatccacaaaaattttcagagacggataccaaggttatcactcagcaggaatat
gtatcacgattacatgaactgaaagatgaaataaatcgtggttggcacagtgaagatcgt
gtaaaatctttgaagttatctataaaggttgcaaggcttctaatggatacatcagtttca
aatttttatccaacattgtttgtcctagttacggatgtactgaacatgcttggggacatg
gtatgggaacgcattaggcagaaagctgaatttgctgaagatggagccagactttgctcc
ttgagagcagagaattttagaacaagtgatgttcctattgatgccaaggaaacttgctat
aactggttttgcaaggttggctccattcgagaacttcttccacgaatttatttggagctg
gctatcttcccttgttggcgttttctgattgagcaaccagtggagtctcttcagcgcttg
gtcatgatgactagagggataggagatccgttagcatctgcctattgtcgcctgtatatt
gcccatcgtgcacagaagttgccctcacatgatacaggatatctaattacatgtcttaat
gacatcacacgcatatttacacggatatcatcaacaaaggaatctgcacatggatgtttc
gctggcagtaagaggtcacttgtcagtctgatggaaccatctgttgagtttattatgaaa
tgcatattaaatgatgcatctcagaggagggcagggaaagtacttgttgagcttggacta
gggagaagtcaggaggaattgtttggtggttccccatgtgtctcaattgtacttcatcat
ttactgaagcaacttcctattgacattgttagctttcatgctgtggatatccttcatctt
attaagtgcagcaatgataactcctatgatcagtgtttgaattataggttggttggactc
aggctgtctgaacagatatctcaaattggcagtgttgaggctgttgtcaatgaagttatt
caggtggtttctgaatatgggcttgatgagtacctgaaggttgtagatgcttatcttgat
attgttcttcaaaatcagatggatggccatctaaagactattctggaagggatctcaaag
ttggcatctgataaagtgttagctgaagatgaactagcaagtttgcaatccatcttggtg
aagcttctttctcattttaaggacttggaacatgtgttttctttgaatcattttcttcag
atcttagatacgatgcatgggaactctcggggcattgtcaatatgcatatacttgatatg
gctacaaggaatggttatgtacatgatccaacaaccatacagttactctttgaaatatca
caggctttacatagtgatactgatcttgtaaacatgaaaaatgatgataaccaacagcaa
gcacggctgatttctcgttttgtccgaatggtagaccatggagtagagtatgaacggcat
ttagcatttcttatggaatgtcgtggggcccttggtagcattgttgaactcaaggaaatt
cttgttcattctagtaattgtttagctacaaaagctctaaaagatgggaaaaagcatact
gcttttgtaaagacttgcatggcatttagtgaaatcacaattccttctattccgggtcac
attaagcaattaaatctttatcttggaacggctgaggttgcactgttaggtggtttagtt
tctcattctgatggactgatagattcagcaatcaactgtttacagagttctgattggatg
gaaggctctcggacacttgattctgatgggatgctttcctccattcgaaaattatgcagc
ctcttgattatggttccaggtaatcctgaagtaggaattttgcatattccaaagagtata
ttattgatcattcattcccggtcatggtctccaagactgaaggcaagaatattatgcgca
ataatttctttatcagctacactttctcaagaaaggctcccataccatgcagatcataca
gagattatgggcaatgatttgttattttttggtgattcatcttatgtgtgtgaacttctc
tcattgacggaatctgttcttcaaaaccttgttgacgttattgaacaagagccttcccgg
gctgcccgtggaagcttgtcacttgaagcttgtaactgcatagcatcatctttcaagata
aacgaacatgtattttctgtctgctcgaaactgattgaaactgccaaattgtgtttgaat
gcgaaggacaagtatctcacttccaccattagttttctggacaagaacttgcctgctgca
gctgtctcatcgtctattgctatctga
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