Gossypium hirsutum (upland cotton): 107917855
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Entry
107917855 CDS
T04793
Name
(RefSeq) syntaxin-51
KO
K08503
syntaxin of plants SYP5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107917855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107917855
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[C] (Qc)
STX8
107917855
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Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
RIFIN
DUF3040
DUF2976
Motif
Other DBs
NCBI-GeneID:
107917855
NCBI-ProteinID:
XP_016702706
UniProt:
A0A1U8KNY5
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Position
A01:complement(12620128..12622773)
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AA seq
230 aa
AA seq
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MASSDTWIKEYNEAARIADDINGMISERISLPASGPETQRHASAIRRKITILGTRLDGLQ
SLLSRPTGKPLTEKEMNRRKDMVANLRSKANQMASAFNMSNFANRESLLGPETKQDAMSR
TVGLDNSGLVGLQRQIMKEQDEGLEKLEETVMSTKHIALAVNEELDLHTRLIDDLDQHVD
VTDSRLRRVQKNLAILNKRAKGSCSCMCMLLAVVGIVILVVAIYLLVKYL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcagacacgtggataaaagaatataatgaagcagcgagaattgctgatgat
atcaatggcatgatatctgaaaggatttccttgcctgcatcgggaccagaaactcagcgt
catgcatccgctataagaaggaagattacgattttagggaccagacttgatggattgcag
tcccttttgtctagacctactgggaaacccttaacagagaaggagatgaatcgccgcaaa
gacatggttgcaaatttgagatctaaagcaaatcagatggcttctgcattcaacatgtca
aactttgccaacagagagagcttgctggggccagaaactaagcaagatgccatgagtaga
acagttggtttggataattctggtcttgttggtcttcagcgacaaataatgaaagagcaa
gatgagggtcttgagaagttggaagagacagtaatgagtacaaagcatattgcattggcg
gtcaatgaagaacttgatctacacaccagactcattgatgacctggaccaacatgtggat
gttactgattctcgcctccggagagtgcagaaaaacctggcaattttgaacaagcgcgcc
aagggcagttgttcctgtatgtgcatgcttttggctgttgtcggaatcgtgattctggtt
gtggccatatacctacttgttaaatatttgtaa
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