KEGG   Gossypium hirsutum (upland cotton): 107917855
Entry
107917855         CDS       T04793                                 
Name
(RefSeq) syntaxin-51
  KO
K08503  syntaxin of plants SYP5
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    107917855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107917855
Membrane trafficking [BR:ghi04131]
 SNARE
  SNAP-25[C] (Qc)
   STX8
    107917855
SSDB
Motif
Pfam: SNARE STX6_10_61_N RIFIN DUF3040 DUF2976
Other DBs
NCBI-GeneID: 107917855
NCBI-ProteinID: XP_016702706
UniProt: A0A1U8KNY5
LinkDB
Position
A01:complement(12620128..12622773)
AA seq 230 aa
MASSDTWIKEYNEAARIADDINGMISERISLPASGPETQRHASAIRRKITILGTRLDGLQ
SLLSRPTGKPLTEKEMNRRKDMVANLRSKANQMASAFNMSNFANRESLLGPETKQDAMSR
TVGLDNSGLVGLQRQIMKEQDEGLEKLEETVMSTKHIALAVNEELDLHTRLIDDLDQHVD
VTDSRLRRVQKNLAILNKRAKGSCSCMCMLLAVVGIVILVVAIYLLVKYL
NT seq 693 nt   +upstreamnt  +downstreamnt
atggcatcttcagacacgtggataaaagaatataatgaagcagcgagaattgctgatgat
atcaatggcatgatatctgaaaggatttccttgcctgcatcgggaccagaaactcagcgt
catgcatccgctataagaaggaagattacgattttagggaccagacttgatggattgcag
tcccttttgtctagacctactgggaaacccttaacagagaaggagatgaatcgccgcaaa
gacatggttgcaaatttgagatctaaagcaaatcagatggcttctgcattcaacatgtca
aactttgccaacagagagagcttgctggggccagaaactaagcaagatgccatgagtaga
acagttggtttggataattctggtcttgttggtcttcagcgacaaataatgaaagagcaa
gatgagggtcttgagaagttggaagagacagtaatgagtacaaagcatattgcattggcg
gtcaatgaagaacttgatctacacaccagactcattgatgacctggaccaacatgtggat
gttactgattctcgcctccggagagtgcagaaaaacctggcaattttgaacaagcgcgcc
aagggcagttgttcctgtatgtgcatgcttttggctgttgtcggaatcgtgattctggtt
gtggccatatacctacttgttaaatatttgtaa

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