Gossypium hirsutum (upland cotton): 107917895
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Entry
107917895 CDS
T04793
Name
(RefSeq) tetratricopeptide repeat protein 27 homolog isoform X1
KO
K24935
tetratricopeptide repeat protein 27
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107917895
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
107917895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_1
TPR_8
TPR_16
TPR_11
TPR-S
TPR_15
Ice_binding
Motif
Other DBs
NCBI-GeneID:
107917895
NCBI-ProteinID:
XP_040968793
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All DBs
Position
A01:17734059..17749992
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AA seq
909 aa
AA seq
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MNMAKREIEILRGHELRLLRCTLCQPPSDPSSHLQPSGFAASLPPLHALISDFLTSVESG
NYLGALSSDAARLVLASPDSDLSSLSPDRVYSDLLDRVESFINEPSIDDAEKACRIVLVV
CVAVAALFWFIQCNLTGPVNRLPKRPLPMKAWWEGSEMVEWENWARNQLMAAGSDLLGKF
CYLQYIVFAKMLLLKTSDLPFEASFMSTFKIRSISWWLFRALLIHQQILDERSSSLFELL
QVFKGETLGHFGSLEKVTSYWGAQLQDGEASTIVSMVHLEAGVLEYIYGRLDPCRRDLES
AEVAAGLQLSVTGILGLRTVHQVEPKAQMILVANTSSKSVSGDINTSIAPDTQLTGPNVS
EASDIYMTPKLVENGNGFGKNECGCVVSTLTTAQQAVVLAQCLLIEKSSPHGEMQGWDMA
PYIEAIDSQKSSYFILKCFCNILRIRWESTRSRTKQRALEMMDNLVESIHKPSPGVPLRL
PFCFSVYIPTIPALRKQYGDILVSCGLIGEALKIFEDLELWDNLIYCYSKLEKKAAAVEL
IKEQLSRMPNDPKLWCSLGDITHSDACYEKALEVSNDRSARAKRCLAYNAYGRGEYEKSK
ILWESALALNSLYSNGWFALGAAALKARNVEKALDGFTRAVQLDPENGEAWNNIACLHMI
KRKSKESFIAFKEALKYKRDSWQMWENYSQVSFDVGNIGQSLEAIKMVLNMTNNKRIDVE
LLEKIMQYLEERTSARLPAITNDDDLPSQTSSDSIPCSVNPSANAEKNAGRLRENEHLLE
FLGKILQQIVRSESRPELWGLYARWHRIKGDLTMCCEALLKQVRSYQGSNLWKDEDRFKS
FAQASLDLCEVYMDISSSTNSRRELHTAEMHLKNTLKQAGIFSDTEEFRKLEACLDEVKI
KLQAETTAS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggccaaacgcgaaatagaaatcctacgagggcatgagctaaggctccttcgc
tgcaccctctgtcaacctccgtctgatccttcttctcacctccaaccttctggtttcgct
gcttcccttcctcctctccacgctcttatctccgacttcctcacttccgtcgagtccggg
aactaccttggggccctttcctcggacgccgcacgactcgtccttgcctcccccgactcc
gacctctcttctctctcgcctgaccgagtttactccgacttactagaccgagtcgaatca
ttcatcaatgaaccttccattgacgatgcggaaaaagcttgtaggattgttcttgttgtg
tgcgttgctgtggccgctttattctggttcattcaatgcaatttgactgggccggtgaat
aggttaccaaagcgtccactaccaatgaaagcatggtgggaaggaagtgagatggtggaa
tgggaaaattgggcgaggaatcaactcatggctgctggctcagacttgcttggcaagttc
tgttatcttcagtacatagtttttgccaaaatgttactcctgaagacaagtgatctacca
tttgaagcaagtttcatgtccacatttaagatcaggagcatttcatggtggctgtttaga
gctttacttattcatcaacaaattttggatgagcggtcttcttccctttttgagttattg
caagtatttaagggtgaaactttaggtcattttggaagtttggaaaaagtgacaagttac
tggggtgctcaattacaagatggggaagcatctacaattgtttcaatggttcatttagaa
gcaggggtgctagaatatatttatggcagacttgatccttgtaggcgagatttggagtca
gctgaagtggcagctggtcttcagctctctgttactggtattcttggcttacgtactgta
catcaggtagaaccaaaggcacaaatgatattggttgcaaatacaagctcgaaatcagta
agcggtgatataaacacttccatagctcctgacacgcaattgactggtcccaatgtcagt
gaagcatctgacatatatatgaccccaaagctggtagagaatggtaatggttttggaaag
aatgagtgtggttgtgttgtgtccactttaacaacagcccagcaggcagtggttttagca
caatgcctgctgattgagaagagtagtccgcatggtgaaatgcaaggttgggatatggct
ccatatattgaggcgattgattctcaaaaatcatcatacttcattttgaagtgcttctgt
aacatattacgaattcgttgggagtcaactcgcagtcgcaccaagcagcgtgctctagag
atgatggataacttggttgagagtattcataagccttcacctggggttccactgaggctt
cctttttgtttttctgtttatatcccgacaattcctgctcttcggaagcaatatggtgat
attttagttagttgtggcttgattggagaggcgcttaaaatctttgaggatttagagttg
tgggataatctaatatactgctacagcaaattagagaagaaagcagctgctgttgaactc
atcaaggagcagctgtctaggatgccaaatgacccaaagttatggtgttcattgggtgat
attacacatagtgatgcctgttatgagaaagccttggaagtttcaaatgataggtcagca
cgagctaagcggtgtcttgcctataatgcatatggaagaggagagtatgagaaatctaag
atcctatgggagtctgccttggccttgaattcgttgtattcaaatggatggtttgcacta
ggtgctgctgcattgaaggctaggaatgttgaaaaggcccttgatggttttactcgtgca
gtgcaacttgatcctgaaaatggagaggcttggaataatattgcttgtttgcatatgatt
aagaggaagagcaaagagtcctttattgccttcaaggaggccttgaaatataaacgagat
agctggcagatgtgggagaactacagtcaagtttcttttgatgttggcaatattggtcag
tctcttgaagctattaagatggtgttaaatatgaccaataataagagaattgatgttgaa
ttgctcgagaaaatcatgcaatatctggaggaaaggacttcagcaagactgcctgctata
accaatgatgatgatcttcccagtcagaccagttctgattcaattccatgttctgttaat
ccatctgcaaatgctgagaagaatgcgggaagattgagagaaaatgagcatttgttggaa
tttcttggaaaaattctacaacagatagttcggagtgaaagtcggccagaattgtggggc
ttatatgcaaggtggcacagaattaaaggtgacctcacaatgtgctgtgaagcactctta
aagcaagttagatcatatcagggatctaatttgtggaaagatgaagaccggtttaaaagc
tttgcacaggcctcattggatctttgtgaggtctacatggatatttcttcctctaccaat
agtcgtcgagaactacatactgctgagatgcacttgaagaacactctaaaacaggctggg
atattttcagacaccgaagaattcaggaagcttgaagcttgccttgatgaagtaaagata
aagctccaggcagagactacagctagttaa
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