Gossypium hirsutum (upland cotton): 107917974
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Entry
107917974 CDS
T04793
Name
(RefSeq) ABC transporter B family member 28-like isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107917974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107917974
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
107917974
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_29
AAA_16
AAA_5
Zeta_toxin
RsgA_GTPase
AAA_15
AAA_30
AAA_25
AAA_28
SKA2
DUF87
Motif
Other DBs
NCBI-GeneID:
107917974
NCBI-ProteinID:
XP_016702925
UniProt:
A0A1U8KKF7
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Position
D08:29022744..29033622
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AA seq
716 aa
AA seq
DB search
MATASASVTSPLLQKISLTGFSTRTRHASKLKLSLHQSCTFAPFSLLSPTKSSRLKNISS
LESRAYVTGPPIVSESDPRINGLETNTVGAEPPKLISWRLLLSLLFQHKLRISVSVLALV
GGTTCTLSMPIFSGRFFEVLIGARKEPLWKLLSKVGLLYSLEPIFTVIFVVNMNTLWETV
MSTLRAQIFRRVLIQKAEFFDRYKVGELSGLLTSDLGSLKDVVSENISRDRGFRALSEVV
GTICILFALSPQLAPILGLLMLFVSVSVAIYKRSTVPVFKAHGMAQASMSDCVTETFSAI
RTVRSFGGEKRQMLMFGSQVLAYQRSGMKLGTFKSINESLTRVAVYISLLALYCLGGSKV
KAGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVISGAEIDEALAYG
LEKDIQKKEDDENIKLFISNGAFGKSQQLDSHYMSALKSTSDVGRLAWSGGVALEDVHFS
YPLRPDVEILNGLNLTLKCGTVTALVGSSGSGKSTIVQLLARFYEPTRGRITVSGEDVRT
FDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDTVSKDDIIKAAKAANAHEFIISLPQ
GYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLME
GRTTLVIAHRLSTVQNAHQIALCSNGQITELGSHLELLARKGQYASLVDTQRLAFE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctccgcctctgtaacctcacctctccttcaaaaaatcagcttgacgggc
ttctccactaggacccgacacgcgagcaaactcaaactcagtttgcaccaatcatgtact
ttcgcgccattttcactcctttcaccgacaaaatcctcaagattgaagaacatctcgagt
ttagaatcccgcgcttacgttaccggtcctccgatagtgagcgagtccgacccaaggata
aacggtttggagactaacaccgttggagctgagccaccgaaattgataagctggaggctt
ctattgagtcttcttttccaacataaactcagaatcagtgtttcggtcttggctctggtt
ggcggcaccacctgtactctttcaatgcctatattttctggacgattcttcgaagtgctc
ataggcgccagaaaggagccgttatggaagctgcttagcaaagtggggcttttatactca
ttggagccgattttcacagttatatttgtggtaaatatgaataccttatgggagacagtt
atgtcaacacttcgagctcagatttttagaagagttctgattcaaaaggcggagtttttt
gatcgatacaaggttggtgagctcagtggtttgctgacatctgatttgggatctttaaaa
gatgttgtaagtgagaacatttcaagggatcgtggattcagggcactttctgaggttgtt
gggacgatttgcatactgtttgctctgtctcctcaactagccccaattctaggccttttg
atgctttttgtgtccgtttcggttgctatatacaagcgatcaactgtacctgtatttaaa
gctcatggaatggcccaagcttctatgtccgactgtgtaacagaaacgttttctgcaatt
cgaactgtaagatcttttggtggggaaaaacgtcaaatgttaatgtttggtagccaggtt
cttgcatatcagagaagtggtatgaagcttggcactttcaaatccataaatgaatctttg
actagggttgctgtttatatttctttactggccttatactgccttggaggaagcaaagtg
aaggcgggtgaactgtctgttggaaccgtggcttcattcataggatacactttcacttta
acctttgccgtgcaagggctggttaatacatttggagaccttcgaggaacttttgctgct
gttgagaggattaactctgttatatctggagcagaaatagatgaagcacttgcttatggt
ctggaaaaagatatccagaagaaagaagatgatgaaaatatcaaattgttcatctccaat
ggtgcttttgggaaaagtcaacaattagattcacattacatgtcagcactgaaatcaaca
agtgatgtgggaagattagcttggtcaggcggtgttgctctggaagatgtacacttttct
tatcctttaaggcccgatgtggaaattcttaatggtcttaatttgactctaaaatgtgga
actgtgactgccctagtgggttcaagtggttctggcaaaagcacaatagtacaactattg
gcacgcttttatgagccaaccagaggtcgtataactgtttctggagaggatgttcggaca
tttgacaagagtgaatgggcccgagttgtttcaatagtgaatcaagaacctgttctcttt
tctgtctctgttggagaaaatattgcatatgggcttccagatgatactgtatccaaggac
gacattattaaggctgccaaagctgcaaatgctcacgaatttataatttctcttccacag
ggctatgacacactggttggtgagcgtggaggcttgctgagtggagggcagaggcagaga
attgcaatagcgagagctcttctcaagaatgctccaatcctgatcctcgatgaggcaaca
agtgctttggatgccgttagtgagcgcctggtacaggatgctttgaatcatctaatggaa
ggcagaacaacattagtgattgctcatagattaagcacagttcagaatgcccatcaaatt
gctctttgctcaaatggccagataacagaacttgggtcccatttggaattgcttgctagg
aaggggcaatatgcttctttagttgacacccaaaggctggcgtttgaataa
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