Gossypium hirsutum (upland cotton): 107918011
Help
Entry
107918011 CDS
T04793
Name
(RefSeq) auxin response factor 5 isoform X1
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107918011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
107918011
NCBI-ProteinID:
XP_040932555
UniProt:
A0A1U8KPS3
LinkDB
All DBs
Position
A01:22786326..22792278
Genome browser
AA seq
945 aa
AA seq
DB search
MGSVVEEKIKQGGLVNVGAQSTLLEEMKLLKEMQDQSGTRKAINSELWHACAGPLVSLPQ
VGSLVYYFPQGHSEQVAVSTKRMATSQIPNYPNLPSQLMCQVHNVTLHADRDTDEIYAQM
SLQPVNSEKDVFPIPDFGLKLSKHPNEFFCKTLTASDTSTHGGFSVPRRAAEKLFPSLDY
SMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEK
SQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVI
PLPRYRKSVYGSQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVE
WDEPGCNDKQNRVSAWEIETPESLFIFPSLTSSLKRPLYPGFSGAESEWGSLMKRPLLQF
PENGNGNLPYSMSNLCSEQLMKMMLKPQLVNHPGIFASPLQQIADVKIPPLEEMKNLQSK
SHPKPQVIQSENMLIENQNLSHPVPDHPDPITSNMSKINANWNPHPANILTQAGTGSSNE
KLKLESKHSAEQLTSTSECNEEKLVASTVNTTMSNQLSFPTQPQIPLHVQNNPWSIQSQL
DSSVLQAHQMLVSQADISTLNSFLPFSDTDEWTSNLSSCQPLSGAYKSPGPIPMVGLQDS
SAVFPVETDDSLTTVGEEIWDPKLNSCRVSSQADQLASFTQQDPCSLNSGGVRDLSDDSN
NQSGIYSSCLNIDVSNGCSTVIDPFVSSAILDEFCSLKDADFQNPSDCLVGNFGSCQDVQ
SQITSASLADSQAFSRQDLPDSSGGNIDFDDSGLLQNNSWKQTAPRVRTYTKVQKAGSVG
RSIDVTSFKNYDELISAIECMFGLKGLLDDPRGSGWKLVYVDYENDVLLVGDDPWEEFVG
CVRCIRILSPTEVQQMSEEGMKLLNSAATVQGINGSNSDGSNANA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgtcgttgaagagaagatcaaacaaggaggtttggttaatgtaggtgcacag
tccactctgcttgaggaaatgaagctattgaaagaaatgcaagatcaatctggtacccgt
aaggctataaattccgagttatggcatgcctgtgctggtccacttgtttccttgcctcag
gtgggaagtcttgtgtattactttcctcaaggacatagcgaacaggtagcagtgtccact
aaaagaatggcgacttctcaaattcccaactacccaaatcttccatctcagttaatgtgc
caagttcataacgttacattacatgcagacagagacaccgacgaaatatatgcccaaatg
agtcttcaaccagtgaactctgaaaaagatgtgttccctataccagacttcggattgaag
ctgagcaagcatcctaatgaatttttctgcaaaactttgactgcaagtgatacaagtaca
cacggtggtttttcagtgccacgtagagcagctgagaagctctttccttcattggattat
tccatgcaacctccaacgcaagagcttgttgtgagagatttgcatgataacacctggacg
tttcgtcatatataccgtgggcagccgaagcgacaccttcttactacagggtggagtttg
tttgtaggatcaaaaagacttagagctggtgattccgttctctttatcagggatgagaaa
tcacagttattggtgggtgtaaggcgggctaatcgtcaacaaaccacattgccatcatct
gttctatctgctgatagtatgcacattggtgtccttgctgccgccgctcatgctgctgcc
aatagaagtccattcacaattttctacaatccaagagcatgcccttcagaatttgtcatc
cctttgcctagataccgtaaatctgtatatgggtctcaagtctcagtcggtatgaggttt
ggaatgatgttcgaaacggaggagtccgggaaacgtagatatatgggtacaatagttggt
attagcgacttggatcctctaagatggcctggctcaaagtggcgaaaccttcaggttgaa
tgggatgaacctggatgtaatgataaacagaatagggtgagcgcatgggaaatcgaaact
cctgaaagcctctttatttttccttcgttaacttcaagtctgaagcgaccattgtatcct
ggattttcaggagcagaatctgaatggggaagcttgatgaaaaggcccctactccagttt
cctgaaaatggaaatgggaatcttccctattcaatgtcaaatttatgttccgaacaattg
atgaagatgatgttgaagcctcagcttgttaaccatcctggaatttttgcttccccctta
caacaaatcgctgatgtaaagatacctccactagaagaaatgaagaacttgcagtctaaa
agccacccaaaaccccaggttatccaatcagaaaatatgttgatagagaaccaaaatctt
tcccacccagtccctgaccatcctgatcccataacttcaaatatgtccaaaatcaatgct
aattggaacccacatcctgcaaatattctaacacaagctgggactgggagcagtaatgaa
aaattaaagttggaatcaaagcattcagccgagcaactgacttcgacatcggaatgcaat
gaggaaaaattggtggcaagtactgtaaacacaactatgtcgaaccaactttctttccct
acccagccccagatcccactccatgtgcaaaataatccctggtcgattcagtcacaattg
gattcatcagtcctccaagctcatcaaatgcttgtatcccaagctgatattagtacttta
aacagctttcttcctttctcagacaccgatgagtggacgtcaaatctttcttcttgccaa
cctctttctggggcgtacaaatcacctggtccgataccaatggttgggttacaggactct
tcagctgtctttccagttgaaactgatgattcgttaactacggtgggtgaggaaatatgg
gatccaaagctgaatagttgcagagtttcatcccaagcagaccaattggcttcattcact
cagcaagatccatgcagtcttaattctggtggggtaagggatttgtctgatgacagcaac
aatcaaagtgggatatatagtagctgtcttaacattgatgttagcaatggttgcagcact
gtgattgatccttttgtttccagtgccattctagatgagttttgctcattgaaagatgct
gattttcaaaacccttcagattgtttggtcgggaactttggttcttgtcaggatgttcag
tctcagattacctctgctagccttgcagattctcaagctttctctcgacaagacttgcct
gacagctccggtggcaatatcgattttgatgacagtggtcttctgcaaaacaattcctgg
aagcaaacagctccacgcgttagaacatatacaaaggttcagaaggcaggatctgtagga
aggtcgattgatgtcacgagttttaagaattatgatgaactaatctctgcaatagaatgc
atgtttggactcaagggtctgctggatgatcccagaggttcaggctggaaattggtgtat
gtggattatgagaatgatgttcttctcgttggagacgatccttgggaggaatttgtcggg
tgtgttcgttgcatccgaattctatcccctacagaagtacaacagatgagtgaagaagga
atgaagcttctcaacagtgctgccacagtgcaaggcatcaatggctctaactcagatggt
tccaatgcaaatgcttaa
DBGET
integrated database retrieval system
