Gossypium hirsutum (upland cotton): 107918109
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Entry
107918109 CDS
T04793
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107918109
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107918109
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107918109
NCBI-ProteinID:
XP_016703113
UniProt:
A0A1U8KQ33
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Position
A12:complement(92450257..92455865)
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AA seq
591 aa
AA seq
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MATASSSSGPFFGIREENQSQTKQQLQQHHTPTSSTGPVDPSPPPKKKRNQPGTPNPDAE
VIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKKKVYLCPE
PTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRC
DCGTLFSRRDSFITHRAFCDALAQETARHPPPLNSIGTHLYGTSNYMGLGLSQVGTQISS
IQDPNNNQTAADILKLGGGGPSRSSQFDHLLPPSMGSSSSSSFRPQQQAMGFVMEESNQI
FNQEHQSQHGLLGNSKPFQGLMQFPPDNNNNNNNNAASNASSAANLFNLSFLSNSGNNGG
AGDYNLTSSGLLISDNFNNENGGNGGTNNASNLFSNNLMSDQMTSNIPSLFSSSVQNNNM
VPQMSATALLQKAAQMGSTSRNKNTNDDSLLRTFANSSSTGTKTSNFGAIFGDTAGSNLH
ELMNSIASGNSPIFGSGYDAVHGQESPYTNRSSMGQEQPPPPPPQSMNVSGGGSDRLTRD
FLGVGHIVRNMSGGAAQQRQGIGISRLSSERNSNITAPTSQQSFGERGNFQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcttcttcatcagggcctttctttggaattagagaagagaatcaaagc
cagacgaaacaacaactacaacaacatcatacgccaacttcatcaactggcccagttgat
ccatcgccgcctcccaagaaaaagagaaaccaacctggaactccaaatccagatgcagaa
gtgatagcactatctcccaagacattaatggctacaaacaggttcatatgcgaggtatgc
aacaaagggttccaaagggagcaaaatttacagcttcatagaaggggacacaacttgcca
tggaagctaaagcagaaaacaacaaaagaagtgaagaagaaggtgtatctatgcccggag
cccacatgcgtccaccatgacccgtcgagggcacttggggaccttacgggcatcaaaaag
cattactcgagaaaacatggtgagaagaaatggaagtgcgagaagtgttccaagaggtac
gccgtgcaatctgattggaaagctcattctaagacctgtggcaccagagagtacagatgt
gactgtggcaccctcttctcaagacgtgacagctttatcactcacagagcattttgtgat
gcactggctcaagaaactgcaaggcaccctcctcctttaaactccattggcacccatttg
tacggaactagcaattatatgggcttagggttatctcaagttggaacccaaatttcatcc
attcaagacccgaataataatcaaactgcagctgacatcctcaaacttggtggtggtggg
ccttcaaggagttcccaatttgatcatcttcttcctccatcaatgggttcttcttcatca
tcatcgtttcgccctcaacaacaggccatgggtttcgtcatggaagaatctaatcagatt
ttcaaccaagaacatcaatcccagcatgggttgttgggaaacagcaaaccgttccaagga
ttaatgcagtttcctcccgacaacaacaacaacaacaacaacaacgccgcaagcaacgct
tcttcggctgccaatctcttcaaccttagcttcctttccaacagcggcaacaatggcggt
gctggcgattataatttaacatcttcgggtttgctcatttctgataatttcaacaatgaa
aacggcggcaatggtggaaccaacaacgcctccaacctcttctccaacaacttaatgagt
gatcaaatgacttccaacatcccttctctctttagctcatcggttcaaaacaataacatg
gtgccccaaatgtcagccaccgcattgcttcaaaaggctgctcaaatgggctctacttca
agaaacaaaaacaccaacgacgattcccttctaagaacctttgcaaactcttcttcaacc
ggaaccaaaacctccaacttcggcgccattttcggagatacggctggcagcaatctacat
gaactaatgaactccattgccagtggaaattcccccattttcggaagcggctatgacgct
gtacatggtcaagaaagcccttacacaaatagaagtagcatgggacaagaacaaccaccg
ccgccaccgccgcaaagtatgaatgttagcggaggcgggtcggatagattgactcgggac
ttccttggggttgggcatatagttagaaacatgagcggaggagcggcacaacaacgacaa
ggaattgggataagcaggctgagttcagagagaaatagtaacataacggcgccgacaagc
cagcaatctttcggagaacgtgggaatttccagtga
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