Gossypium hirsutum (upland cotton): 107918110
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Entry
107918110 CDS
T04793
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107918110
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107918110
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107918110
NCBI-ProteinID:
XP_016703114
UniProt:
A0A1U8KQX2
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Position
A12:92443460..92447294
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AA seq
560 aa
AA seq
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MATASSSATFFGNSAENENPMIKQQSSAAPTSSTAPTTAPHSKKKRNQPGTPNPDVEVIA
LSPKSLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKKKVYLCPEPTC
VHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAQETARHPTNNLTPIGSHHLFGGNHHQMSLGLSQNQPLSSN
MLRLGSGTGVAKFEHLNSTASNPSSLQNMPAFFMGDAANQGFLPEHQSHHGNGPYINKPL
HGLMQLPDLQGNTNSTAPNSANLFNLGFFPSNSGASSISTGENGGASNSGFLSGNQFNMG
DVQVGSGMASLYSSSSMQHENISPNMSATALLQKAAQMGSTTSNNTCSLLRGLGSSSSSG
IKSDRQVFSPNNFESGGSLRSQMENDSNLQGLMNSLANGNSSIFGQDHSNFGGFTGNGMT
VEHHSNNANFSNVDEAKLHQKLGVRIGETDKLTLDFLGVGEMVGNMGGNGQHGINIGSLN
PDVKSSAQATSQQFGCPKLV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcttcatcgtcggcaactttcttcggaaacagcgcagaaaatgaaaacccg
atgataaaacaacaatcatccgccgcacccacttcctcaactgctccaaccactgcacct
cactctaagaaaaagagaaatcaacctggaactccaaatccagatgtggaagtgatagca
ctatctcccaagtctttaatggcaaccaacagattcatctgtgaggtatgcaacaaaggg
tttcagagggagcagaatttacagctccatagaagaggacacaatctgccatggaagcta
aagcagaagagcacaaaagaagtgaagaagaaggtttatctttgccctgaacccacatgc
gtccaccatgaaccctcgagggcacttggggaccttacgggcatcaaaaagcattactcg
agaaaacatggggagaagaaatggaagtgtgagaagtgttccaagaggtatgccgtgcaa
tctgattggaaagctcattctaagacttgcggcactagggagtacagatgtgactgtggc
actctcttctcaagacgtgatagtttcatcacccatcgggccttttgcgatgcattggct
caagaaactgcaaggcaccccaccaataacttaaccccaatcggaagccatcatctattt
ggaggtaatcatcatcaaatgagcttaggattatcccagaatcaaccattatcgagcaac
atgttgcggttgggaagcggcactggagtcgcaaagttcgagcacctcaacagtaccgcg
tccaatccttcttcattgcagaacatgccggcgttcttcatgggggatgcggcgaaccaa
ggttttctcccagaacatcaatctcatcatggaaatggaccatacataaacaaaccctta
catggtcttatgcaacttccggaccttcaaggcaatactaacagtacggcgcccaattcc
gccaatcttttcaatttaggcttctttcccagcaacagtggtgcgagcagcataagtacc
ggcgaaaacggcggagcttcgaattccggatttttaagcggtaatcagtttaacatgggt
gatgtgcaggttggttcggggatggcctctctttatagcagtagttcaatgcaacatgag
aacatttctccaaacatgtcggcaactgcattgcttcaaaaagctgctcaaatgggttca
actacaagcaacaacacttgctcattgctacggggattggggagttcttcgtctagtggg
atcaaatccgacagacaagttttttcccctaacaatttcgagagtggtggcagtctaaga
tcacagatggagaatgatagcaatcttcaaggactaatgaactctcttgcaaatggcaac
tcctccattttcggacaagatcatagcaacttcggagggttcaccggaaatgggatgaca
gtggaacatcatagcaataacgccaacttttccaacgttgatgaagctaagttacatcaa
aaacttggggtaagaatcggggagactgataaattaacattggattttcttggagtgggg
gaaatggtaggcaatatgggtggaaatggtcaacatgggatcaatatcgggtctttgaac
cccgatgtgaagtcatcggctcaagcaacctcacaacaatttggctgcccaaaacttgtc
taa
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