Gossypium hirsutum (upland cotton): 107918124
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Entry
107918124 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107918124
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107918124
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
56B_RHH
Motif
Other DBs
NCBI-GeneID:
107918124
NCBI-ProteinID:
XP_016703137
UniProt:
A0A1U8KKZ9
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Position
A12:92345227..92352540
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AA seq
731 aa
AA seq
DB search
MKRVLDESSDDGWENHSFKPSRVSKKSANPPPIESFSFNSQSHTNYYGQSSDDCIEIQHL
EDDGVFNLEDDDVEAEDVARPVNRVRXFVVDDNEEDDENACSDEVFDVESSEEIEELQED
DVVGKALQKCAKISTELRKELYGSSAASCERYAEVEASSVRIVTQNDVDVACGAVDSGFR
PVLKPYQLVGVNFLLLLHRKGIGGAILADELGLGKTIQAITYLTLLKHLKNDPGPHLIVC
PASVLENWDIELKKWCPSFSVLQHHGAGRAAYSKELSSLSKAGLPPPFNVLLVCYSLFER
HSVQQKDDRKILKRWHWSCVLMDEAHALKDKNSYGWKNLMSVARTAKQRLMLTGTPLQND
LHGLWLLLEFMMPDLFATEDVDLKKRLNAEDRELVGRMKSILGPFILRRLKSVVMQQLVP
KMQRVEHVIMEKQQEDAYREAIEEYRTISRARIAKLSESDMNNIVGILPQRQISNYFVQF
RKIANHPLLVRRIYNDEDVVRFAKRLHSMGVFECTLDRVIEELKNYNDFSINRLLIRYGI
TGGKGTLSDEYVMLSAKCQALAKLLPSLKRSGHRVLIFSQWTSMLDILEWTLDVIGVTYK
RFDGSTQVTDRQTIVDDFNNDTSIFVCLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQ
AEDRCHRIGQIRPVTIYRLVTKGTVDENVYEIAKRKLTLDAAVLESGIAIENEGDASEKT
MGQILTSLLMN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgttttggacgaaagttcagacgatggatgggagaatcattctttcaagcct
tcccgggtttcaaagaaaagcgctaaccctcctccaatcgaatctttctctttcaattcc
caatctcacactaattattacggccaaagcagcgacgattgcatcgaaatccaacatttg
gaggacgacggggtcttcaacttggaagacgacgatgttgaagccgaggatgtcgcccgg
cctgtcaaccgtgtccgttgattcgtggttgatgacaacgaggaagacgatgaaaatgct
tgctctgatgaggtgtttgatgttgagtcaagtgaagaaatagaggaactgcaagaggat
gacgtggtagggaaggcgttgcaaaagtgtgcgaaaatatcgactgagcttcggaaggag
ctctatgggagttctgccgcttcttgtgaacgatacgccgaagtagaagcttcttccgtg
agaatcgttacacagaatgatgttgatgttgcatgtggggctgtggattctggttttcgg
ccagttctcaagccatatcaactagttggtgtaaactttcttcttctgttgcatcgaaag
ggtattggaggagctatattggctgatgagctgggtcttgggaaaaccattcaggctatt
acatatttaactttgctgaaacatctgaaaaatgatcctggtcctcatttgatagtttgt
cctgcgtcagttttagaaaactgggatatagaacttaagaagtggtgcccgtcattttct
gtacttcagcatcatggtgctggcagagcagcttactcgaaagagttgagctctttgtcc
aaagctggattaccacctccatttaatgtcctccttgtgtgctattcactttttgaaaga
cacagtgtgcaacagaaggatgatcgtaaaattctgaaacgttggcactggagctgtgtg
ctaatggacgaggcccatgctttaaaggataagaacagctatgggtggaaaaacctaatg
tcagttgctcgaactgcaaaacagcgtcttatgctaacaggcacaccgctgcaaaatgat
ttacatgggctgtggttgttgctagagttcatgatgcctgatctttttgccactgaggat
gtagacttgaaaaagcgactaaatgcagaagatagggagttggttggtcgtatgaagtcc
attctgggaccattcatcttgaggcgtctgaaatctgttgtgatgcagcaacttgtccca
aagatgcaacgggttgagcatgtaattatggagaagcaacaagaagatgcatatagggaa
gccatagaggagtatcgtacaatctcacgagcacggatagctaagctttcagaatctgat
atgaataatattgttggaattcttcctcaacgtcagatctcaaactattttgttcagttt
agaaagattgcaaatcatccattattagtgaggcgaatttataatgatgaggacgttgtt
cgctttgctaaaaggttgcattcaatgggtgtttttgaatgtaccttggacagagtaatt
gaggaactaaagaattacaatgacttctctattaatcggcttttaattcgctatggaatt
actggtggtaaaggaactctttctgatgagtatgttatgctttcagctaaatgccaggct
ttagcaaaacttctcccttcactcaagagaagtgggcatcgagttctgatttttagccaa
tggacatcaatgcttgatatcttagagtggactttagatgttattggagttacatataaa
cggtttgatggaagcactcaggtgactgataggcagactatagttgatgatttcaataat
gacacttcaatatttgtgtgcttgttgtccacgagagctggagggcagggtttgaacttg
acaggagctgatactgtaattatccatgacatggattttaatccacagattgaccggcag
gctgaagatcgttgccatcgaattggccaaattaggccagttactatatacaggctggtt
actaaaggtactgttgatgagaatgtttatgagattgcaaaaaggaagttgactctggat
gctgcagtgctagagtcgggtattgctatagagaatgaaggtgacgcatctgagaaaacg
atgggacaaatactgacatcactattgatgaactag
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