KEGG   Gossypium hirsutum (upland cotton): 107918158
Entry
107918158         CDS       T04793                                 
Name
(RefSeq) AP-5 complex subunit zeta-1
  KO
K19025  AP-5 complex subunit zeta-1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107918158
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     107918158
SSDB
Motif
Pfam: SPG48 TPR_AP5Z1_C
Other DBs
NCBI-GeneID: 107918158
NCBI-ProteinID: XP_040931999
UniProt: A0ABM2YN81
LinkDB
Position
A01:complement(11197388..11203038)
AA seq 570 aa
MSDRERDWDFYLRTVSNSARDSSFANDPASDPSLLHAVKKLCDFCRQEEKYSEDLVARVY
PHINKLFQRSIASLSQPTSPNGILLLVILQFFLDFGEVVLHDADPSLRTFFRSCLSREFA
DPVVAAATLDFLNVNKDKLLFSFPNLLPQFFPLLLKLIAWNGEKLEKAFLKVFPGLVSPG
SFLPLFPSLVDLPILVVALEKVERSSGSLIGSSIASIQKSAAPEMLLALMDEAYTGSTIG
DGGGDSESEESSTIDVADPVFLELLKDENDGLAERHWTSPGVAAVLQASINSPQSDRLKQ
ILSITPRLLDMYFTIALRDANNSLICALIPILMARNSTLFPDKNYMYEVRRRLLEFMLAS
FQRSPDFIALLKKPIVDRLGEAYDSPEKTELALQLCWAVGEHGGGGGSHKDAARELFESL
ELLLYENLSSSRLGLRQESINSDSRNFRKSSQSRLLCFVITAIAKLATYHRELLPRARVA
LGKVARSRISDSRVWRRARDYLGLMDDPAICLSVLGPSQPSHGHPHNPGTVNWNDGGTKM
IAHIPFYILGEQEGPPFHDFSFPDILPRRR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgagcgatcgagaacgagattgggacttctatcttcgaaccgtatcgaacagtgcaaga
gactcgagtttcgctaacgatccagcctccgatccttctcttcttcacgccgtcaagaaa
ctctgcgatttctgtagacaagaagagaaatactctgaggatttggtcgctagggtttat
cctcatatcaacaagctcttccaacgctctattgcttccctctctcaacctacctctccc
aacggaattctcttactggtcattcttcaatttttccttgattttggagaggtggttctc
catgatgctgaccctagtctgaggacatttttccgttcatgtttgagccgtgagttcgca
gatcctgttgttgcagctgcaactcttgattttctaaatgtaaacaaggacaaacttctt
ttttctttccccaacttactacctcagtttttccctttgcttctgaagctgattgcatgg
aacggagaaaaattagaaaaggcatttctcaaggtttttccaggattggtatcacctgga
tcatttctccccctatttccatctttagtagatttgccaatcttggttgttgcattggaa
aaggtagaacgaagctcagggtcactaatcggaagcagtatagcttctatccagaagagt
gcggctcctgagatgctacttgcactcatggatgaagcctatacgggttctaccattgga
gatggaggaggagactctgagtccgaggaaagcagtacgattgatgttgctgatcctgtg
tttctggaacttcttaaggatgaaaatgatggtcttgctgaacgccattggacttctcct
ggggttgctgcagtactacaagcttcaataaatagccctcagtctgatagattaaagcag
atactcagtatcacacctcggcttcttgatatgtactttactatagctttgcgcgatgca
aataactcattaatctgtgcattaattcccattctgatggctagaaattctacattattt
cctgacaagaactatatgtatgaggttcgtagaaggctcctagagttcatgcttgcttca
tttcagcgttctccagattttattgcacttttgaagaagcctatagttgacagactcggg
gaagcatatgacagcccagaaaagacagaattggcgttacaattgtgttgggctgtagga
gagcatggtgggggtggtggatctcacaaagatgcagctagggaactttttgaaagttta
gagctacttttgtatgaaaacctttcatctagtcgtctaggtctgaggcaggagtctatc
aattctgacagcaggaacttcagaaagtcatcacagtcgaggcttctgtgttttgttatc
acagctattgccaagcttgctacatatcaccgtgaactattgccaagggcacgtgtagca
ttgggcaaggttgctcgatctcgaatatcagattcaagggtttggaggcgagctcgtgat
tatctgggattaatggatgaccccgctatctgtctgtctgtcttgggaccttcccagcct
tcacatgggcacccacacaatccaggcaccgtcaactggaatgatggaggcacaaaaatg
attgcgcatattccattttacattcttggtgagcaggaaggtccacccttccatgatttt
tcgtttccagatattcttccgagaagaagatag

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