Gossypium hirsutum (upland cotton): 107918198
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Entry
107918198 CDS
T04793
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107918198
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
107918198
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107918198
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
OYE-like_second_a-b
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
107918198
NCBI-ProteinID:
XP_016703219
UniProt:
A0A1U8KR82
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Position
D06:5707073..5709737
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AA seq
390 aa
AA seq
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MIFKSLRAGRYVHQFWSKSTLFLDCICGLGYSVISSSMKEIKVKDASPMCTLAPDTEPRI
QSSSSVSEDRKCSSISVKSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVAAFLESLPTG
SLILDAGCGNGKYLGLNSSCYFIGCDISPSLIKICADRGHEVLVADAVNLPYRTNFGDAA
ISIAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDKSLLTKWTPLTERYLEE
WIGPGSPRVRGPSSFTLESIPETEENGLGGHPKDSRVSLTENMQQSSRSTPQNEDDSMVS
RDGKSQQEYFVPWHLPYHRAEVSGASAGALANGLAKKDDKKGAVVYNRYYHVFGEGELER
LVSGMDNAVIVDKFYDKSNWCIILEKTLEG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaaatctcttagagctggtagatacgttcatcaattttggagtaaaagcact
ctattccttgattgtatctgtggacttggttattcagtaatttctagcagtatgaaagaa
atcaaagtaaaagatgcttctcctatgtgtactcttgcacctgatactgaacccagaatc
caatcatcttcctctgtaagtgaggaccgtaagtgttcatctataagtgtgaaatctacc
cctgaaatagaaaagaaatatgttcatcatgtttatgatgctattgccccccattttagt
tccacccgctttgccaagtggcccaaggtcgctgctttcttggaatctttgcctactggt
tcacttatcttagatgcaggatgtggaaatgggaaatatctaggtttaaattctagctgc
tattttataggatgtgatataagtccttcccttatcaaaatatgtgctgatagagggcat
gaagttttggttgcagatgctgttaatcttccttacagaactaattttggtgatgcagca
atctctattgctgtgttacatcacttaagtacagagaataggagaaagaaagcgattgaa
gaattagtgcgagttgttaaaaagggtggcctagttctaataaccgtttgggctgttgaa
caagaggataagtcattacttaccaaatggactccacttacagaaaggtatttagaagag
tggataggaccaggtagtcctcgtgttcgtggcccttcatccttcactctagaaagcatt
cctgaaactgaggaaaatggtttgggtgggcatccaaaagattctagagtgagtttaact
gagaatatgcaacaatcatcacgctcaaccccccaaaatgaagatgattcaatggtttct
agagatggaaagagtcagcaggaatattttgtcccttggcacttaccttatcaccgtgcc
gaagttagtggtgcctctgctggtgctctagcaaatggtctggcaaagaaagatgataag
aagggtgctgtagtgtacaacagatattaccatgtgttcggtgaaggcgagcttgagagg
ttggtatcgggaatggataatgctgtgattgttgataagttttatgacaaatcaaactgg
tgcatcattcttgagaaaacattagaaggataa
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