Gossypium hirsutum (upland cotton): 107918287
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Entry
107918287 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107918287
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107918287
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107918287
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_13
zf-C3HC4_3
Actin_micro
Motif
Other DBs
NCBI-GeneID:
107918287
NCBI-ProteinID:
XP_040955971
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All DBs
Position
D08:47530104..47532612
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AA seq
598 aa
AA seq
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MDDSCAVCAETLEWVAYGACGHRDVCSNCVARLRFICNNRRCCICKTESDVIFVTKSLGD
YTSLVNDFSVLPYDVREGRMGSYWYHEDTQAFFDDVDHYEMIKAMCKLSCTVCDKMEDRS
NDGMKRRVQFRNIDQLKNHLIHRHRRAMCSLCLAGRKVFICEQKLYTRAQLNQHINTGNS
EVDGTESERGGFMGHPKCVFCNTPFYGESELYSHMSIEHYTCHICQRRHPGHNKYYKNYD
DLEIHFRLDHYLCEDEVCLAKKFIVFKSVADLKRHNTSEHGGRMFRARCNTALQIPTSSQ
HHRNNEDNRYGRGRTVRRQPSDNDYQLSMAIEASLRTANVPSASSTVLVVSAHGDTNDVH
PFESLSTTDPESSSRYLQALGAGSRGAPFQASSFPPLPMVPSTSRQKSKQGSEDNTKQAH
LPCQKNKNEKSFSLVQALAMQASSSSSQITKTTNIAAVASPVTGKGVAELSYTSSSHAQV
QTQSTTADILTESGSGMSSGNVSMISHSSSAPNHANGGNPESEPLVSGFPPVCGAQRHKH
SSSSRVLRIVEEVHMTNKSLAEKMTQLTDAYNANLESNVLQLKGGADGSVKLTYNNVF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgtgctgtgtgtgctgaaactttagaatgggttgcctacggcgcctgc
ggtcaccgggacgtgtgctccaactgcgtcgctcgtctccgcttcatctgcaacaatcgc
cgctgctgcatctgcaagactgagtccgatgtcatcttcgtcactaagtctttaggggat
tacacgagcttggtcaatgacttctctgtattgccatatgatgtaagagaaggacggatg
ggttcgtactggtaccatgaggatacgcaagcctttttcgatgatgttgatcactacgaa
atgatcaaggcaatgtgcaagctttcatgtactgtatgtgacaagatggaggatcgatcc
aatgatgggatgaagcgacgggtgcagtttaggaacattgaccagttgaaaaatcatttg
attcataggcatagacgggctatgtgcagcctatgtttggcaggacggaaggtgtttata
tgtgaacaaaaactgtatacaagagcacagttgaatcaacatataaacacaggtaactct
gaggtggatgggaccgagagtgagagaggtggattcatggggcatccaaagtgtgtgttc
tgcaacaccccattctatggggaaagtgagttatactcccacatgtccatagagcattat
acatgtcatatatgtcaaaggcggcatccaggacataataaatattacaagaattatgat
gatctcgagatccattttcgcctagatcattacctatgtgaggatgaggtttgccttgcc
aaaaagtttattgtctttaagtctgtagctgacctaaagaggcataataccagtgaacat
ggaggtcgcatgtttcgtgcacggtgtaatactgctttacaaataccgaccagctctcaa
catcatcgaaataatgaagataatcgttatggaagggggcgaacggttcgacgtcaacca
tctgataatgactatcaactttcaatggccattgaggcaagtttgaggacagccaatgtg
ccctcagcgtcatctactgtgctggttgtctctgctcatggggacacaaatgatgttcat
ccttttgaatcattatctacaacagatccggaatcatcttcaagatatcttcaagcattg
ggggcaggctctaggggtgcaccttttcaagcatcttcttttcctccacttcccatggtt
cccagcaccagtcgacaaaaatctaaacagggctcagaagataacaccaagcaagctcat
ctaccatgccagaagaacaagaatgaaaagtcttttagtttagttcaggcattggccatg
caagcatcaagtagttcaagtcagattactaaaacaacaaatattgcagccgtggcatca
cctgttacaggtaagggagttgcagaattgagctatacaagttcaagtcatgcacaggtt
cagactcaatccacaacagcagatatattaacagaatctggctctggaatgagctcaggc
aatgtaagtatgattagccactcttcatcagctccaaatcatgctaatggtggaaaccct
gagtcagaaccattggtttctgggtttcctccggtttgtggagcacaaaggcacaagcat
tcttcaagcagccgggttctgaggattgtagaagaagttcatatgaccaacaaatctttg
gctgaaaagatgacacagttaactgacgcctataatgctaatttagaaagtaatgtcctg
caactgaaaggcggggctgatggcagtgtcaagctgacatataataatgtcttttag
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