Gossypium hirsutum (upland cotton): 107918404
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Entry
107918404 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107918404
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107918404
NCBI-ProteinID:
XP_016703453
UniProt:
A0A1U8KR22
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Position
D08:complement(2509049..2520257)
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AA seq
594 aa
AA seq
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MATNDYESGLKMMEELTTDARQIQDQLLGELLSKNAETEYLQGFLHGQTDKQLFKKKVPI
VTYEHLKPYIDRIANGEASSDILLVEPLTGFSLSSGTSGGLPKLVPTTAESAHKTATFNK
LYRSVMIKHFGDINQAGKRMELMFAKPEVKTPSGLKASAVSTRAFKGSSFKAILPKLYTS
PFEIIFCPDTKQSMYCQILFGLIQRNEVIMIGSIFASTVVRSIKFLENNWKELCSNIKTG
QISEWITDSGYRNAASLILKPNPELVDLIEDVCSCKSWEGIIRKLWPKTKYIGTVCTGAM
LQYTAELEFYCGGLPLVSGFYACSEGAIGINLEPLCKPSDVSYTFLPNMVYYEFLSIKED
CDTDSQNQVQLNAMSHHEDTGPVDLVNVKLGQCYEVLVTSSMGLYRYKVRDIIKVTGFHN
NTPQFQFVGRQNVALGVDMERTSEADILKAVAEAKALLDPLGLILTEYTSYGDTSSTPGH
YVIFWEIKPKEGNNNNNNGKELDPKVMEECCSKMEDSLHFTYRMYRKENMIAALEIRVVK
QGTFESLLDYFVSKGASLSQYKTPICIKSKEALNILDSRVIAKFFSPRTPTQDN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatgattatgaaagtgggttgaagatgatggaggaactaacaacagatgct
cgacaaattcaagaccagttattgggtgaattactgagtaaaaatgctgaaactgagtat
ttacagggattcctccatggccaaaccgacaagcaactctttaaaaaaaaggtacccatc
gttacttacgaacatctcaagccttatattgatcggattgccaatggggaggcatcatct
gatatacttttagttgaacccctcactgggttctctttaagctctgggacttcgggtggg
ctgccgaagctggtacctaccacggctgaaagtgctcacaaaacggcgacgtttaataag
ttgtaccggtctgtgatgataaagcactttggtgacataaaccaagccggtaaaaggatg
gaacttatgtttgccaaaccagaggtcaaaactccttctggactcaaagcaagtgcagtc
tcaacaagagcattcaaggggagtagctttaaagctattttacccaagctttacactagc
ccttttgagattatcttttgcccggacaccaaacaaagcatgtactgtcaaatacttttt
ggtttaatacaacgtaatgaggtcatcatgattggctcaatctttgcatctacggttgta
agaagtatcaagttcttagaaaataactggaaagagctatgctctaatataaaaaccggt
caaataagtgaatggatcactgactcgggttacagaaatgcagcatcattgatcttgaag
cctaatccagaattggttgacttgatagaagacgtatgtagttgtaaatcatgggaagga
ataatcagaaagctatggcctaaaacaaagtacattggtaccgtatgtacaggtgccatg
ctacaatatactgcagaacttgagttctattgtggtgggctaccattagtgtcaggtttt
tatgcttgctcggaaggtgccatcgggatcaacttggaacctctatgtaaaccttcagat
gtctcttacacatttctcccaaatatggtttactatgaattcctttcgataaaagaagac
tgtgatacagattctcaaaaccaggttcagttaaacgccatgtctcaccatgaagatacc
ggacctgttgatctcgtaaacgtgaagcttggtcaatgttatgaagtacttgtcacatct
tctatgggattatatcgatataaagttagagacattattaaggtgaccggtttccacaac
aatacacctcagttccaatttgttgggaggcaaaacgttgctctaggcgttgatatggaa
agaacaagtgaagcagacatcttaaaggcagtggcagaagcaaaggcacttctcgatccg
ctcggactcatcttaacagaatacactagctacggtgatacatcttcaacaccaggtcac
tatgtcatattctgggagattaagccaaaagaaggcaacaacaacaacaacaacggcaaa
gaacttgacccaaaggtaatggaagaatgttgctctaaaatggaagattcattgcatttt
acatatagaatgtataggaaggaaaacatgattgcagctttggagattagggttgttaaa
caaggaacttttgagtcattactggattactttgtgtccaaaggagcttctttgagccaa
tacaagacacctatttgcatcaaatctaaagaagctttaaatatattggattcaagagtt
atagcaaagtttttcagcccaagaactcctacacaagacaactaa
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