Gossypium hirsutum (upland cotton): 107918642
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Entry
107918642 CDS
T04793
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B isoform X2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107918642
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107918642
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107918642
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
FtsJ
DUF348
Serglycin
Motif
Other DBs
NCBI-GeneID:
107918642
NCBI-ProteinID:
XP_016703720
UniProt:
A0A1U8KMQ4
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Position
D13:47470394..47475422
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AA seq
384 aa
AA seq
DB search
MASNKSQGAKSKNQPPKKKQRNDLFIDKKRPTKKDEVLDDVSDGHSEEEEEAGDLLDGDE
QMSGFDDDDVSEISDEDDAPWADDFLQGSDDNEDSGSSSTSGSGSDSHSDETDIEEKSRA
IDEQLAREEEDAQAEMELNIKEESDEFRLPTKEELEAEQQRPPDLANLQMRMKEIVRVLS
NFKHMRQEGTTRKDYIDQLKIDLGSYYGYNEFLIRVLVDMFPVVELMELIEAFEKPRPTC
IRTNTLRTHRRDLADVLSKRGVELDQLSKWSKVGLVVYNSHVPIGATPEYLAGFYYIQGA
SSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNSGIIYANEIREARLKSLTANLHR
MGVTNTIVCNYDGRELKGFKSINC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaataagagccaaggagcgaaatcaaagaaccaacctccaaaaaagaagcaa
aggaatgatcttttcattgataaaaagcgacccaccaaaaaagatgaggttttggatgat
gtctctgatggccacagcgaagaagaagaagaagctggagacttattggatggagatgaa
caaatgtctggttttgatgatgatgatgtctctgaaatttcagatgaggatgatgctccc
tgggctgatgatttccttcaaggaagtgatgataatgaagacagtggttcaagttccact
tcaggttcaggttccgattcccattcagatgaaacagatatagaggagaagtccagggct
atcgatgaacaacttgcgagggaagaagaagatgcacaagctgagatggagctgaacatt
aaagaagagtctgatgagttcagactgccaacaaaagaggaacttgaagcagagcaacaa
cgtccgcctgatcttgcaaatcttcagatgagaatgaaagagattgttcgagtgctctca
aattttaagcatatgaggcaagaaggaacgacaaggaaggattatattgaccaacttaaa
attgatttgggttcttactatggctacaatgaattcctgatcagggttttggttgatatg
tttccggttgttgaactcatggaacttattgaagcttttgaaaagcctcgacctacatgt
atccggacgaacactttaaggactcacagaagggatctggccgacgttctttccaaaaga
ggagtagaactggatcaattaagcaagtggtcaaaagttggattggtggtgtataattcg
catgtgcccattggtgccactccggagtatttggctggcttttactatatacaaggtgca
agctcctttttgcctgttatggctcttgctcctcgggagaaggaacgggtagttgatatg
gcagctgcacctggtggtaaaacgacttatgttgctgcgctcatgaaaaatagtggaata
atttatgcaaatgaaattagggaagcaagactgaagtcacttacggcaaatttgcatcgc
atgggtgtaacaaacacaatagtttgtaattatgatgggagggagttgaaaggcttcaaa
agcataaattgttga
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