Gossypium hirsutum (upland cotton): 107919652
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Entry
107919652 CDS
T04793
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107919652
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107919652
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GFIT
Motif
Pfam:
bHLH_ILI
HLH
PMFBP1_N
VAB2
CENP-F_leu_zip
DUF948
Allexi_40kDa
YwqH-like
FlxA
Knl1_RWD_C
CRLF3_N
CLZ
Swi5
Motif
Other DBs
NCBI-GeneID:
107919652
NCBI-ProteinID:
XP_016704558
UniProt:
A0A1U8KU74
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Position
D13:complement(12645398..12646667)
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AA seq
89 aa
AA seq
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MSGRRSGSGVSSISDDQITHLVFKLQQLIPELCARRSHKASASKVLQETSDYIRNLHKEV
EDLSDRLSQLLASIDTDNDQAAIVRSLLM
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagaagatcaggttcaggtgtttccagcatcagcgatgatcaaatcacccat
cttgtattcaagttgcaacagcttatccctgagctttgtgcaaggcgctcccacaaggca
tcagcttccaaggtcttacaggagacttccgattatataagaaacttacacaaagaggta
gaggacctaagcgaccgcttatcccagctgttagcttccatagacactgataacgaccaa
gcagccattgtcaggagtttacttatgtaa
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