Gossypium hirsutum (upland cotton): 107919848
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Entry
107919848 CDS
T04793
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107919848
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107919848
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
107919848
NCBI-ProteinID:
XP_016704729
UniProt:
A0A1U8KVG2
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Position
D13:complement(6282439..6294368)
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AA seq
711 aa
AA seq
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MGSTFFSIPIKRTMPDPTHSANGPSKRSKPPSTTLYIPPGQVAFRLLCHVSRVGGIIGKS
GSVIKQLQQATGTKIRIEDAPAECPDRVITIIGPNAVNTKVVLDLGGDGEGGSRVEEIEV
SKAQEALVKVFERILEVAAESNGAALGMVSCRLLAEVKQAGGVIGKGGKVVEKIREETGT
KIRVLTDNLPACASLKEEIVEIEGAVLAVKKALVAVSHRLQDCPSVSKTRAIENRSIEPI
LTETLHRPIDLLPQESLRRAIEVYPQETSHKHIEVVPQDPFRRPIDVIPQESFHRHIEAG
SHEALPDLHVDHLSQRSSMVPSIPSDSTSYATRIHPLSLKPEKAPPLDTRTFQQEVVFKI
LCFSDRVGCVIGKGGATIKALQSDTGATVTIGAAITDCDERLVTVTASENPESQYSPAQK
AVVLVFVKVFEASIEKGLESGAGKGSNVTARLVVPSTQVGCLLGKGGAVISEMRKATSTS
IRILGKDQVPKCVSENDQVVQISGGYSNVKDAIYHVTGTLRDNHFSTSMRTVGAKSSSSV
LTETSPYERFLDNSPLELQASSGVSHSLGWHTSLAMSNTDSFGLSYSLDRPRSPGLWTSE
MATRLNPRSIIDSGRGLTSFRGGLELGSGNKSAVVTNTTVEIRVPENVIDSVYGENGRNL
ARLREISGAKVIVHEPQIGTSDRIVVISGTPDQTQAAQSLLQAFILTGPTR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcaccttcttctctataccaataaagcgaaccatgcccgacccgacccattct
gctaacggaccctccaagcgttccaagcctccgtctactactctctacatccctcccggc
caggtggccttccgtctcctttgtcacgtgtcgcgtgtcgggggcatcatcggcaagtcg
ggcagcgtcatcaagcaactgcaacaggctacgggtaccaagatccgaatcgaggatgcc
ccggccgaatgccccgaccgggttattaccatcataggtcctaatgctgttaataccaag
gttgtgcttgaccttggcggcgacggtgagggtggtagtagagttgaggaaatcgaggtg
tccaaggcgcaggaggcgctggtgaaggtattcgagaggattctggaggtggcggctgag
agcaatggggcagccttggggatggtttcttgtcggttgttggcagaggttaagcaagct
gggggtgtgattgggaaaggtggtaaagtagtggagaagataagggaagaaactgggacc
aaaattagggttttgacggataatctaccggcttgtgctagccttaaggaggagattgtg
gagattgaaggagctgttttagctgtaaaaaaggcgcttgttgctgtctcacaccgcctc
caagactgtccttccgtcagtaaaacaagggcaattgaaaacagaagcattgaaccaatt
ctaacagagactttgcacagacctattgacttacttccccaagagagtttgcgcagggct
attgaggtatatcctcaggagacttcgcacaaacacatagaggtggttcctcaggaccca
ttccgcagacctattgacgttatacctcaggaatcatttcatagacacattgaggctggt
tcacatgaggctttacctgatttgcatgtagatcatctttcacagcgtagttccatggta
cctagtatacccagtgactctaccagttatgccaccagaattcatcctttgtctctgaag
cccgagaaggctcctcctttggatactagaacatttcagcaggaagtggttttcaaaatt
ctttgcttcagtgatagggttggttgtgttattggaaagggaggtgcaactattaaggcc
cttcaaagtgatactggagctaccgttaccattggagctgcaatcactgattgtgatgaa
cggttggttactgttactgcatcagagaatccagaatcacagtattctccagcacaaaag
gctgttgtccttgtttttgtaaaagtttttgaggcttctattgaaaagggtctagaatca
ggcgcaggtaagggttcaaatgtcactgcccggctcgtagttccttcaacccaagttggc
tgtctgttgggaaaaggaggggccgtaatatctgaaatgcgcaaagcaacttctaccagc
atacggattttagggaaggaccaggtccctaagtgtgtcagtgaaaatgatcaagtggta
cagatttcaggagggtattcgaatgtaaaagatgctatatatcatgtgactggtacactg
agagataaccatttttctacctctatgagaactgtgggagcaaaaagcagttcctcagtt
ttaacagagaccagtccttatgaaagatttttggacaattcccctcttgagttgcaagca
tcaagtggagtttctcacagtcttggttggcatacttctttggcaatgagtaatacggat
tcctttggactttcttatagcttagatcggcctcgttcaccaggattgtggacatcagag
atggctactcgattgaatccaaggagcatcatagacagtggaagaggactgacttctttt
agaggtggattagaacttggcagtggaaacaaatctgctgttgtgacaaatacaactgta
gagattagagttcctgagaatgttattgactctgtttatggggagaatggtcgcaatcta
gctcgcttaagagagatctctggtgccaaggtcatagtgcatgaacctcaaataggaaca
agtgacaggattgttgttatatctgggacacctgatcaaacccaggccgctcagagcctc
ctacaagcattcatcctcactggtccaactcgctga
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