Gossypium hirsutum (upland cotton): 107919890
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Entry
107919890 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107919890
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107919890
04121 Ubiquitin system [BR:
ghi04121
]
107919890
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107919890
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107919890
Membrane trafficking [BR:
ghi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
107919890
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107919890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107919890
NCBI-ProteinID:
XP_016704799
UniProt:
A0A1U8KQT1
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All DBs
Position
D13:53327846..53333391
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AA seq
573 aa
AA seq
DB search
MEQETSMRAIIRNWKHGYRALLHMRWAADFGFHISVVGLVGVVGFVLAIIRDGKLGEKRK
KHLEKLCLVPGLQNLGNNCFLNVILQALASCSYFQSFLQKILDECESTLVDRQGESLPLT
ITLSDLLEELGMAGERRVALSPHKVMSALSLYIQNFDLTSQQDAAEAFLHLLSSLREEFS
DIYLPNQSTLADIFASQTSRILTPERKEVQNEQKRWQQHYLGPFDGIIGSILSCRSCSYQ
ISLDFQFFHSLPLFPVLYGASTIMAGCTLEDCLWQFVLAEKLENYYCSHCWHSAAIKFLS
CKGANEIEIEKLKRCSAEESCDCRSFCCLENLPWSNNFSNTLKQLCIARCPKILCLHLQR
ASINEVGELIKLQGHIAFPLILDLSPFMTTKVEITNWEGVHKGQLKLQNQKTRPHLNLIN
AQYESILNRISKPTGEKVSSEILVANGSQCTTSPGESLPEKSKLYPTDGCSKASNIDMHE
QHNDKVSLTSKLPPSETKLYRLASVVEHFGRPGGGHYTVYRSMRTKSDEEDSDEYSEPAT
TKWFCISDSQVCSVSEKDVLAAEASLLFYERIV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaaactagtatgagggcaataatccgcaattggaaacatggttatagagct
ttgttgcatatgagatgggctgctgattttgggtttcatatatctgtggttggtttagtg
ggagttgttggttttgtattggctataataagagatggtaaattgggggaaaagagaaaa
aaacatttggagaagttatgcttagttcctgggttgcaaaatcttggcaataactgcttc
ttgaatgtaatattgcaggctctggctagctgctcatattttcagtcttttcttcagaag
atactagacgaatgtgaatcaacactagttgacagacagggtgaaagcctgccacttaca
attactttatctgatctcttagaagaattaggcatggctggagaaaggagagtcgcatta
agcccacataaagttatgagtgcattgtcgctttatattcaaaattttgatttaacaagc
cagcaggatgcagctgaagcgtttctccatcttttgtcttcactaagagaagaattttct
gatatatatcttcccaatcaaagtactctagcagatatttttgcttcgcaaactagtagg
attctaactccagagaggaaggaggttcagaatgagcagaaaagatggcagcaacactat
cttggaccttttgatggtataattggtagcattttatcttgccgcagttgttcatatcag
atttctttggattttcaattttttcacagcttgcccctttttccagtgctttatggtgct
tccaccattatggctggatgtaccttggaggattgcttatggcagtttgtccttgctgaa
aaacttgagaattactactgcagccattgttggcacagtgctgcaataaagtttttatcg
tgtaaaggagcaaatgagattgagattgaaaagttgaagagatgcagtgcagaagaatcc
tgtgattgtcgtagtttttgctgtctagaaaatctaccctggtcaaataacttttctaat
actctaaagcagctatgtattgctcgttgtccaaagattctatgtcttcatctacaacgt
gcttcaattaacgaggtcggggaactaatcaagcttcagggccatattgcttttccattg
attttagacctgtcaccattcatgactactaaggtggaaataacgaactgggaaggggtc
cataaagggcaactgaagctgcaaaatcaaaagacaaggcctcatctcaaccttatcaat
gcccaatatgaaagcattctcaatcgcatcagtaaaccaacaggagaaaaggtctcttca
gaaatattagttgcaaacggctctcaatgtactacttcccccggagaatctttgcctgag
aagagtaagctgtacccaactgatggctgttcaaaggcctccaacatagacatgcatgag
caacataatgacaaggtaagtttgaccagcaagttacctccttcagaaactaaattatac
cgacttgcttcagttgtggagcactttgggagacctggaggtgggcattacactgtttac
agaagtatgagaactaaatctgatgaggaagattctgatgaatactccgagcctgctaca
accaagtggttctgcatttcagattctcaagtatgtagtgtctccgagaaggatgtttta
gctgcagaagcaagcttacttttctatgagaggatcgtataa
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