KEGG   Gossypium hirsutum (upland cotton): 107919892
Entry
107919892         CDS       T04793                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03420  Nucleotide excision repair
ghi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107919892
   03460 Fanconi anemia pathway
    107919892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107919892
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107919892
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107919892
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107919892
SSDB
Motif
Pfam: ERCC4 CARD
Other DBs
NCBI-GeneID: 107919892
NCBI-ProteinID: XP_016704803
UniProt: A0A1U8KUY7
LinkDB
Position
A08:113459344..113463841
AA seq 967 aa
MVLKFHEQIVSDLLEDTSGGLVVLSSGLSLPKLLSSFLSFHSRSSGSLLLLHPPQLSSSL
KSLLLSLSPDLPLFEITADLPSSNRLSLYSSNLILVLSPRILIVDLLTQKAQTSLVSGIV
FLNAHSLSESSTESFIVRIIKTFNKNASVYAFSDKPHSMVSGFAKTERTMKSLFIKKLHL
WPRFQVNVSEELERDPPEVVDIRVPMSKYMLGIQKAIVEVMDACLKEMRKTNKVDVEDLT
VENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKYLDTL
RVSESFRSVWIFAESSYKVFDYAKKRVYRFAKSDDTKISTPSKNLARKKRKLKEDDNNND
EAIAGTSSTSTSNGVALQEVLEESPKWKVLREVLEEIEEERKKQASSGEPLLDVEEDNNG
ITLVACKDECSCMQLEDCIANGSQKVMRDEWQKYLLSKVELRGVQTPQKKKPKAPKGYGI
LDGIVPVTPARNAEVSSACKQEHDALLAAAAEIKRNQAKKEKDAEKDPEPQVGSRGHGKG
KGRGRTRQGHARNKDGSNNTEVAKGDRPEVYGSENEGQINEINPTVIVDGVSGKNIYNDR
NADNPKQLPPVHFHALERDQPILDVLKPSVIIVYHPDMTFVREIEVYKAENPGKKVRVYF
LFYDASTEVQKFKASIRRENGAFESLIRQKSMMMIPVDQNDFCLGLNSSSEIQVSSSQNS
ITRKAGGRKDAEKEMQVIVDMREFMSSLPNVLHQKGMLIIPVTLEVGDYVLSPLICVERK
SIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPTNIISK
LSLLVLHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAMRVGVPSEEGIIENDVRAE
NYNTSAVEFLRRLPGVTDSNYRTIMDGCKSLAELALLPIEKLAELMGGRKAAQTLRDFLD
AKYPTLL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggtcctaaaattccatgaacaaatagtctccgacctcctcgaagacacaagtggcggc
ctcgtagtcctttcctccggcctttccctcccaaaactcctctcttctttcctctctttt
cactcccgatccagcggctctctcctccttctccacccacctcaactctcctcctccctc
aaatccctcctcctttccctttcccctgacctccctctcttcgaaataaccgccgatctc
ccttcctctaaccgcctctccctctactcctccaaccttatcctcgtcctctcacctcgt
atcctcattgttgacctcttaacccaaaaggcccaaacttccttagtttccggtatcgtt
ttccttaacgctcattcgctttccgaaagctcaactgaatctttcattgtcagaatcatc
aagactttcaacaaaaatgcttctgtttacgcgttttcagacaagcctcactctatggtt
tctgggttcgcgaaaacggagaggacgatgaagagtttgttcatcaagaagcttcatctt
tggccgaggtttcaagtgaatgtttcggaggaattggagagggatccgccggaagtggtg
gatataagggtgccgatgagtaaatacatgttggggattcaaaaagccattgtggaagtt
atggatgcttgcttgaaggaaatgaggaaaactaataaggttgatgtggaggatctaaca
gtggagaatgggttgtttaagtcatttgatgagattgtgaggaggcaattggatcccatt
tggcatactttggggaagaagacgaaacagctcgtttcggatttgaaaactttgaggaag
ttgttggattatcttgttaggtatgatgcagtaagttatctaaagtatttggatactctt
cgagtgtcagagagttttcgatctgtgtggatattcgcagagtccagttataaggtattt
gactatgcaaagaagcgtgtttatcgttttgcaaagtctgatgataccaaaattagtacg
cctagcaagaacttggccagaaaaaagagaaaattgaaggaagatgacaacaataatgat
gaagcaattgctggtacttcatctacaagtacaagtaacggagtggctcttcaagaagtt
ttggaagagtctccaaagtggaaggtgttacgtgaggtccttgaagagatagaagaggaa
agaaaaaagcaagcatcatcgggagaaccattgttggatgttgaagaggacaataatggt
attactttagtggcgtgcaaagatgagtgctcgtgcatgcaacttgaagattgcattgct
aatggctcacagaaggtcatgagggatgaatggcaaaagtaccttttaagcaaagttgaa
cttcgtggtgtgcaaactcctcagaagaaaaaacccaaagctcctaaaggttatgggatt
cttgatggtattgttcctgtaacacctgcccggaatgctgaagttagcagtgcatgcaag
caggaacatgatgcattattagctgcagcagcagagataaaaagaaaccaagctaagaag
gaaaaggatgctgaaaaagatcctgaacctcaagttggcagcagaggacatgggaaaggg
aagggaagaggaaggactagacaaggccatgctaggaataaagatggctccaataatact
gaggtagcaaaaggtgatagacctgaagtttatggttcagaaaatgaaggccaaataaat
gaaatcaaccctactgtaattgttgatggggtttctgggaagaatatttacaatgataga
aatgcagacaaccctaagcagttaccaccagttcactttcatgctttggagagagatcag
cctatattagatgttttaaagccatctgtaattattgtttaccatccagatatgactttt
gttagggagattgaagtctacaaagctgaaaatcctggaaaaaaggtgagggtctatttt
cttttctatgatgcttctactgaagtccaaaagttcaaagcaagcatccgtagagaaaat
ggagcatttgaatctttgatcaggcagaaatcaatgatgatgatcccagttgatcagaac
gatttctgccttggtttaaattcttcatcggagatacaagtttcaagttctcagaactca
atcaccagaaaggctgggggaagaaaggatgctgagaaggaaatgcaggtaatagtggat
atgagagagttcatgagtagtcttccaaatgtccttcatcagaagggcatgcttataatc
ccagtaaccttagaagttggtgattatgttctctcaccacttatttgcgttgaaaggaaa
agcattcaagatctttttatgagtttcacatcaggtcgtctttaccaccaagtggaaact
atggttcgttattaccgaataccggttcttctaattgagttttcacaagacaaaagcttt
tcatttcagtctgcaagtgatattggtgatgatgtaacaccaactaatattatatccaaa
ctgtcattacttgttctgcattttccccgcctacgaatcatctggtctcggagcttgcat
gcaactgctgaaatatttgcttctcttaaggcaaatcaggatgaacccgatgagacaaag
gcaatgagagttggtgtaccctcagaagagggtatcatagaaaatgatgttagagctgaa
aactacaatacatcagctgttgagtttttgagacgactcccaggagtaacagattccaac
tacaggactataatggatggatgtaaaagcttggctgaacttgcacttcttcctatagag
aagctagctgaactaatgggtggtcgaaaagctgcccagactttaagagatttcctcgat
gctaagtatccaaccttgttgtga

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