Gossypium hirsutum (upland cotton): 107919957
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Entry
107919957 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107919957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107919957
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107919957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
ETRAMP
RIFIN
PLU-1
RGCC
Fusion_gly
Cation_ATPase_C
SNARE
Pox_EPC_I2-L1
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
107919957
NCBI-ProteinID:
XP_016704898
UniProt:
A0A1U8KV62
LinkDB
All DBs
Position
A12:94519400..94521702
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AA seq
219 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSRKCNSASAITDSEQKRQKFSDINSGIDEADVLIRKMDLEA
RSLQPGVKASLLAKLREYKADLNKLKKEFKRISSPNAHDELLESGIADIHSVSAEQRDRL
SMSVERLNQSSERIKESRRTVLETEELGISILEDLHQQRQTLLHAHNKLYDVDSAIDKSK
KVLTTMSRRITKNKWIVISIIVALVLAIILILYYKISHG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggttttcgaaggttatgaacgacagtactgcgaactctctgccaatctttcc
cgaaaatgcaattctgcttctgctattacagattcagaacagaagagacagaaattttcg
gatatcaattctgggatcgatgaggctgatgtcctgattcggaaaatggacctggaagca
aggagtttgcaaccaggggttaaggcttctcttcttgctaaattaagggaatacaaagct
gatctgaacaaattgaagaaggaattcaagagaatttcttcacctaatgctcatgatgag
ttgttagaatcagggattgctgatatacactcggtttctgctgagcaaagggatcgattg
tcaatgtcagtggagagactaaatcagtcaagtgagagaattaaggagagtagaagaact
gttctggaaacagaagagctcggtatctcgatacttgaagatttgcatcaacagcgacaa
actcttttacatgcccacaacaagctttatgatgtggatagcgccattgacaagagcaag
aaagttttaacaaccatgtcaagaaggattaccaagaacaaatggatcgttatctcgata
atcgtagcacttgtccttgcaatcatcttaatcctgtattacaagatttcacatggctga
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