Gossypium hirsutum (upland cotton): 107920031
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Entry
107920031 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107920031
04121 Ubiquitin system [BR:
ghi04121
]
107920031
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107920031
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107920031
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107920031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Prok-RING_1
zf-RING_10
Prok-RING_4
Rad50_zn_hook
zf-RING_Vps41
zf_RING_Vps8
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107920031
NCBI-ProteinID:
XP_016705014
UniProt:
A0A1U8KW72
LinkDB
All DBs
Position
D13:complement(8789513..8793096)
Genome browser
AA seq
339 aa
AA seq
DB search
MSFDASVHGGGGDANTDGATNKPFFCYQCNRTVTVTIYPSADPSCPLCNEGFLEEYENPS
FENPNPNSNPLSEPFLSVSDPFSSLLPLLFPSSSSTTSSSPSPASIDLHNPNSFGSTRSG
RGDPFAFDPFTFIQNHLNDLRSRGAQIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQ
QLAENDPNRYGTPPASKSAIDALPSVKIAKNNLNSEFNQCAVCMDEFEEGAEAKQMPCKH
LYHKDCILPWLELHNSCPVCRHELPTDDPDYERRVRGAQATGGDNDGDSSGGDNEQRSGD
NRTAERSFRISLPWPFRARGSGSGSGSGDNPQTRQEDLD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgacgccagcgtccacggtggcggcggcgacgctaacaccgacggcgcgacc
aataagcctttcttttgctaccaatgtaaccgtaccgtcaccgtaacaatctacccttcc
gctgacccttcttgtcctctatgcaacgaagggttcctcgaagaatacgaaaaccctagc
tttgaaaacccgaatccgaactcaaacccgttatccgaaccctttttgtcggtatcggat
ccgttctcttccttgctcccgctccttttcccttcctcttcttcaacgacgagttcttca
ccgtctcctgcttcaattgaccttcataaccctaactcattcgggtcgacccggtcaggc
cggggtgacccattcgctttcgatccatttaccttcatccaaaaccatctcaacgatctc
cgttcaagaggagcccaaatcgagttcgtgatccagaataatccgtccgagccgggtttt
cggcttccagcgaacattggggattatttcatcggaccgggcctcgaacaactgatccag
caactggctgagaacgatccgaaccggtatgggaccccaccggcatcgaaatcggccatc
gacgcgctaccttcggtgaagatagcgaagaataacttgaattcggagttcaaccagtgc
gcggtttgtatggacgagttcgaggaaggggctgaagcgaagcaaatgccctgtaagcat
ctttatcacaaggactgcatacttccgtggctggaattgcataattcctgccctgtttgt
cgtcacgagctgcctaccgatgatcctgattatgagaggagggttcgtggggcgcaggct
actggtggagataatgacggcgatagtagtggcggtgataatgagcagaggtctggggat
aatcggacggcggagaggagttttaggatatcgctgccctggccgtttcgggctcgtggg
tcgggttcaggatcaggatcaggtgataatccgcagaccaggcaagaagatttggattga
DBGET
integrated database retrieval system
