Gossypium hirsutum (upland cotton): 107920074
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Entry
107920074 CDS
T04793
Name
(RefSeq) transcription factor MYB88-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107920074
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
107920074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107920074
NCBI-ProteinID:
XP_016705081
UniProt:
A0A1U8KRH9
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Position
D13:complement(12451076..12455846)
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AA seq
477 aa
AA seq
DB search
MQETRKKNGGNEDSKKKERHIVTWTQEEDDILRGQISLHGTENWAIIASKFKDKTTRQCR
RRWYTYLNSDFKKGGWSPEEDMLLCEAQKVFGNRWTEIAKVVSGRTDNAVKNRFSTLCKK
RAKYEALAKENTATCINPNNKRILLQNGFNLDGTADCTDSVKRMRRSHVSDLTENCIFGD
RSHRVSGTMMNQQLRHPFAVLGQNLHNAKNVMVQSQVNNVKEVSSDAAQDNSTRGTFLRK
DDPKINALMQQAELLSSLALKVNSDNTEQSLENAWKMLQDFLNQSKENDILRYTMSDIDL
QLEDFKDLLEDLRSSNEGSRPSWRQPDLYEASPASSEYSTGSTLMPHPAGETGEEAQGKI
DELHQDIPSSHIGEQNCGSEEKRAVSGANTNQVEIIPSCDDITNNIVASTSSSIEFSSPI
QVTPLFRSLAAGIPSPNFSESERNFLLKTLGMESPSPNPGNNHSQPPPCKRVLLQSL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaacaaggaagaagaatggtggcaatgaagattccaagaagaaggagcgtcat
atagtgacatggacccaagaggaagatgatatccttcgtggacaaatcagtttacatgga
actgaaaactgggctatcattgcctctaaattcaaggataaaacaacaaggcagtgcaga
aggagatggtacacatacttgaattcagatttcaagaaaggaggatggtcaccagaggaa
gatatgcttttatgtgaggcacaaaaagtctttggcaatagatggactgaaatagcaaag
gtggtttcaggcagaacggataatgctgttaaaaatcgattctcgacactatgtaagaag
agagccaaatatgaagccttagcaaaagagaatacagcaacatgtataaacccaaataac
aaaagaattttacttcaaaatgggttcaatttagatggaacagcagactgtactgattct
gtcaaaagaatgaggagatcccacgtttctgatcttactgaaaactgcatctttggagat
agatcacatagagtatctggaacaatgatgaatcaacagctaagacatccctttgcagtt
ttgggtcaaaatctccacaatgctaaaaatgtcatggttcaatctcaagtcaacaatgtt
aaggaggtttcgagcgacgcagctcaggataatagcactcgaggaacatttctcagaaag
gatgatccaaagataaatgctttgatgcagcaagcagagctactcagctcacttgcattg
aaagttaactcggacaacacagaacaaagtctggaaaatgcttggaagatgctccaagac
tttttgaatcagagtaaagaaaatgacatcctgagatatacaatgtctgatattgatttg
caacttgaagatttcaaagacttgctagaggatttaaggagtagtaatgagggaagtcga
ccgtcttggaggcaacctgatctgtacgaggcatcgccagccagctcggaatacagtaca
gggtcgacactgatgcctcatccagctggggaaacaggagaagaagcccaaggtaagata
gatgaactgcaccaggatataccttcaagtcatatcggagagcagaattgcgggagtgag
gagaaaagagctgtttcgggtgcaaacactaatcaagtcgagataatcccatcgtgtgac
gacattacaaataatatagttgcttctacctcatcaagcatagagttcagttccccaatc
caagttaccccacttttcagatctctggcagcagggattcccagtccaaatttttcagaa
agtgaaaggaacttcctacttaagacacttggaatggagtccccttctcctaatccggga
aataatcattcacaaccaccaccttgcaaacgagtcctcctccagagtctataa
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