Gossypium hirsutum (upland cotton): 107920175
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Entry
107920175 CDS
T04793
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107920175
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
107920175
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_12
TPR_11
zf-MYND
TPR_NPHP3
SET
TPR_10
TPR_17
TPR_MalT
TPR_9
Motif
Other DBs
NCBI-GeneID:
107920175
NCBI-ProteinID:
XP_016705216
UniProt:
A0A1U8KRW6
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Position
A13:complement(938184..946008)
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AA seq
774 aa
AA seq
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MEKLKCVVPDRLKRRVEESHVDDLPSLSSSLLQLFLSLPQFHQLISELAAEPATQAGLCG
KNEGAALDLKEKGNQCYSSGDHSQALRCYSQLQALRLAPIDAHHTGKNLVATLYLNRASL
FHKMGLSMESLRDCSRALEISPSYPKVWCRRGKVNATLGNYEDSVHDLSVAKDMEPSIGG
KKQIERELDMLARHHEKKIPKPASQKSVEIPDVPSEIKLQCVKTPDKGRGMVSQFDIPQA
SLIHAEEPYAVVILKHCRETHCHYCLNELPADTIPCFSCSLPLYCSQHCQVRAGGPIHIP
DTMVGSNFKPTLECIPEHKHECQGVHWPAILPSDVVLAGRVVVKTMEQKGQFTDVPNLSE
TLGLCESYSKMSPESKLELHIYSIVLLFCLHHSFSSELSINGDSASQIVILLSQIRVNSI
AVVRMKSNTNDSYDQQDWFQNFSFGEAEAASSVEQVRVGQALYKAASLFNHSCLPNIHAY
FISRTLLLRTTEFVSGGCPLELSYGPPVGQWDCKDRLRFLEEEYFFRCWCRGCSEVNESD
LVISGFCCVNPNCSGVILDNLVANCEKQKPKVPETISNESHLQVHELKDIDIKKVANISL
DQTQSSFHVGSGYCLKCGSYCNFASRSKEVKKAWTDFRRLQDSIASKDTCGTNLTDALRS
LGLLRSILHAYNKGIAEAEDILAKAFCFIGDFEPARDHCKASIEILEKLYGPNHIAIGYE
LAKLASIQLALGDCTAVYNINRLSAMFSTYYGPQAGIIFPYLLVLERERSRIIQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcttaaatgtgtggttccagataggctgaagcggagggtggaggagagccat
gttgacgatcttccttcactatcctcttctctgctccaattgttcctcagtttgccgcag
ttccatcagttgatctcagagttggcagcagagccagcgacccaggccggtctttgtggc
aagaacgagggtgccgctttggacttgaaagaaaagggcaaccaatgctattcctctgga
gatcattcccaggctctgcgttgctattctcagttacaggcgcttcgtcttgctcccatt
gacgcccaccacactggcaagaatcttgttgctactttgtatttaaaccgagcttcattg
tttcacaaaatgggcctgtcaatggagtctcttcgagattgcagcagggcactagaaatt
tctccttcctatccaaaggtgtggtgtaggagaggtaaggtgaatgctacactggggaac
tacgaagattcggtccatgacttaagtgttgctaaggatatggagccatcaataggggga
aagaaacagatagaaagggagctggacatgcttgcacggcatcatgagaaaaaaattcct
aaaccagccagccagaaaagtgtagaaattccagatgtgccttcagaaataaaacttcag
tgtgtaaaaacaccagacaaaggaaggggcatggtttctcagtttgacattcctcaagct
tccttgattcatgctgaagaaccttatgctgtggttattttgaagcattgccgagaaact
cattgccattattgcttgaatgaactacctgcagatacaatcccctgcttttcatgttca
ttgccattgtactgttcccagcactgccaagtgcgagcaggtgggccaattcatattcca
gatacaatggtaggcagtaatttcaagccaacacttgagtgcattccagaacataaacac
gaatgtcaaggtgtgcactggcctgcaatattgccttctgatgtagttctggctggtcga
gtagtagtgaaaaccatggagcagaagggacaattcactgatgttcctaatctttcagaa
accttggggctttgtgaaagttattcaaaaatgtcgccagaaagcaaattggaactacac
atatattccattgtattgttattttgtctccatcactctttcagttctgaactgtcaatt
aatggagactctgcatcacagattgtcatacttctatctcaaattagagtgaattctatt
gcagttgtccgtatgaaatccaataccaatgattcttatgatcagcaagattggtttcaa
aacttctcctttggtgaggcagaagcagctagtagtgtggaacaggtcagagtaggtcag
gctctttacaaagcagccagtttgttcaaccattcctgcctgccaaacattcatgcatat
tttatttcacgtacgctcttactacgaacaacagagtttgtgtctggagggtgtcccctg
gaattgtcttatggtcctccggttggccaatgggactgtaaagaccgccttagatttctt
gaagaagagtacttttttcgatgttggtgccgtggttgttcagaagtgaatgaatctgat
cttgtaattagtggattttgttgtgttaatccaaattgttctggagtgattttagacaat
cttgtggctaattgtgaaaagcagaagcctaaagttccagaaacaataagcaatgagtct
catttgcaggtacacgagctcaaggatattgacatcaagaaagtggctaacatttcactt
gatcaaacacaaagttccttccatgttggttctgggtattgcttgaaatgcggttcttat
tgcaattttgcttctaggagcaaagaagttaaaaaagcttggactgatttcagaaggttg
caggattcaatagcttcaaaagatacgtgcggtactaaccttacagatgctttgagatct
cttggtcttctaagatcaatactgcatgcttataacaaaggcattgcagaagcagaggac
attcttgcgaaggcattttgtttcattggtgattttgagccagctagagaccattgtaaa
gcatccattgagatactggaaaagctctatggccccaatcacattgcaattggatatgaa
ttggcaaagctggcatccattcagctagctttgggtgattgtactgctgtctataacata
aatcgactgagtgccatgttttctacatattatggaccacaagcaggcattatatttcct
tatctacttgttcttgagagagaaaggagccgaatcatacaatga
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