KEGG   Gossypium hirsutum (upland cotton): 107920243
Entry
107920243         CDS       T04793                                 
Name
(RefSeq) tubulin alpha-5 chain
  KO
K07374  tubulin alpha
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04145  Phagosome
ghi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107920243
  09142 Cell motility
   04814 Motor proteins
    107920243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107920243
   03036 Chromosome and associated proteins [BR:ghi03036]
    107920243
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107920243
   04147 Exosome [BR:ghi04147]
    107920243
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107920243
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     107920243
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    107920243
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107920243
  Exosomal proteins of other body fluids (saliva and urine)
   107920243
  Exosomal proteins of colorectal cancer cells
   107920243
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 107920243
NCBI-ProteinID: XP_016705336
UniProt: A0A1U8KS94
LinkDB
Position
D13:complement(33780265..33782922)
AA seq 449 aa
MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGACHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRAVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGIEDEEEPEDY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggaggtgattagtatccatattggtcaagctggaattcaggtcggaaattcctgt
tgggagctttattgtcttgaacatggaattcaacccgatgggatgatgcctagtgacacc
acggtaggtgcttgccacgatgcttttaataccttctttagtgagactgggtcgggcaag
catgtgccaagggctatatttgttgatctagagcccactgtcattgatgaagttagaacc
gggacctatagacaactgtttcatccggagcaacttatttccggaaaggaagatgctgct
aataactttgctagaggacattatactgttggtagggagattgtggatctttgccttgac
cgagtgagaaaattggctgataactgcactggtctacaaggatttttggtatttaatgct
gttggcggtggaactggttcgggtttgggctcattgcttttggagcgcttgtcagtagat
tatggaaagaagtcaaagcttgggtttactatctacccttctcctcaggtttctacagca
gttgtggaaccttacaatagcgtgctctcaacacattctctccttgaacacacagatgtt
tctgtgcttcttgacaatgaagctatatacgatatctgcaggagatccttggacatcgaa
aggccaacttataccaacttgaatcgcttgatatcccaaattatctcttctttgaccact
tcattgaggtttgatggcgccataaatgtggacattacggagtttcagactaaccttgtg
ccttatcctcgtatccatttcatgctttcatcttatgccccagtaatctcagctgcaaaa
gcttaccatgagcagatatctgttcctgagatcacaagtgccgtctttgaaccctcaagc
atgatggccaaatgcgatccgagacatgggaaatacatggcatgctgtttaatgtaccgt
ggggatgttgtaccaaaggatgtcaatgccgctgttgctaccatcaaaactaagcgggca
gttcagtttgtagactggtgccctaccggtttcaagtgcggcatcaactatcagccaccg
acggtggtaccagggggtgatcttgctaaagtacaacgtgcagtgtgtatgatcagcaat
aacaccgctgtggccgaggtttttgctcgaatcgaccacaaatttgatctcatgtatgcc
aagagagcattcgttcactggtatgtaggtgaaggaatggaggaaggtgaattctcggaa
gcccgtgaagatcttgctgctctagagaaagactatgaggaagttggggcagaaggtatt
gaagacgaagaagaaccggaagattactag

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