Gossypium hirsutum (upland cotton): 107920243
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Entry
107920243 CDS
T04793
Name
(RefSeq) tubulin alpha-5 chain
KO
K07374
tubulin alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04145
Phagosome
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107920243
09142 Cell motility
04814 Motor proteins
107920243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107920243
03036 Chromosome and associated proteins [BR:
ghi03036
]
107920243
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107920243
04147 Exosome [BR:
ghi04147
]
107920243
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107920243
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
107920243
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
107920243
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107920243
Exosomal proteins of other body fluids (saliva and urine)
107920243
Exosomal proteins of colorectal cancer cells
107920243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
107920243
NCBI-ProteinID:
XP_016705336
UniProt:
A0A1U8KS94
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All DBs
Position
D13:complement(33780265..33782922)
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AA seq
449 aa
AA seq
DB search
MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGACHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRAVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGIEDEEEPEDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggtgattagtatccatattggtcaagctggaattcaggtcggaaattcctgt
tgggagctttattgtcttgaacatggaattcaacccgatgggatgatgcctagtgacacc
acggtaggtgcttgccacgatgcttttaataccttctttagtgagactgggtcgggcaag
catgtgccaagggctatatttgttgatctagagcccactgtcattgatgaagttagaacc
gggacctatagacaactgtttcatccggagcaacttatttccggaaaggaagatgctgct
aataactttgctagaggacattatactgttggtagggagattgtggatctttgccttgac
cgagtgagaaaattggctgataactgcactggtctacaaggatttttggtatttaatgct
gttggcggtggaactggttcgggtttgggctcattgcttttggagcgcttgtcagtagat
tatggaaagaagtcaaagcttgggtttactatctacccttctcctcaggtttctacagca
gttgtggaaccttacaatagcgtgctctcaacacattctctccttgaacacacagatgtt
tctgtgcttcttgacaatgaagctatatacgatatctgcaggagatccttggacatcgaa
aggccaacttataccaacttgaatcgcttgatatcccaaattatctcttctttgaccact
tcattgaggtttgatggcgccataaatgtggacattacggagtttcagactaaccttgtg
ccttatcctcgtatccatttcatgctttcatcttatgccccagtaatctcagctgcaaaa
gcttaccatgagcagatatctgttcctgagatcacaagtgccgtctttgaaccctcaagc
atgatggccaaatgcgatccgagacatgggaaatacatggcatgctgtttaatgtaccgt
ggggatgttgtaccaaaggatgtcaatgccgctgttgctaccatcaaaactaagcgggca
gttcagtttgtagactggtgccctaccggtttcaagtgcggcatcaactatcagccaccg
acggtggtaccagggggtgatcttgctaaagtacaacgtgcagtgtgtatgatcagcaat
aacaccgctgtggccgaggtttttgctcgaatcgaccacaaatttgatctcatgtatgcc
aagagagcattcgttcactggtatgtaggtgaaggaatggaggaaggtgaattctcggaa
gcccgtgaagatcttgctgctctagagaaagactatgaggaagttggggcagaaggtatt
gaagacgaagaagaaccggaagattactag
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