KEGG   Gossypium hirsutum (upland cotton): 107920288
Entry
107920288         CDS       T04793                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107920288
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     107920288
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    107920288
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 107920288
NCBI-ProteinID: XP_040964852
UniProt: A0ABM3BCQ1
LinkDB
Position
D13:24443493..24447905
AA seq 726 aa
MDDCPKDICAVTDSSTEGVPASQPPLDPDGTTQRSPEELVARAIAPVKREFLRPPPSSRT
TQNNPASDANVKQPQANLVQEKKSKRQLKRERRQEQKSPLNLCPEIAKTGDVNACSYKDK
CRFSHDIEAFMAQKPADLEGDCPFIKADAPCPYGLACRFAGTHKDNAPAATSNLLKKSSE
VNGLSKDVQKLLWKNKMRFTKADVVVKSLGLAGPNWKVKKLVDKEEDEVGLDGSHAADKT
DCKKVVDDSVDCSECPSTFPAAVNAEEACETDKLRPLKKAKLVVDEKSSDEGEGATVLEK
DNEKNSAETEPADNVLAEPDRSPKISNLKDATVLEKYNEKKSAETEPADDVHAEPDKSLK
IHPREKMLIDFREKLYLAPLTTVGNLPFRRVCKTLGADVTCGEMAMCTNLLQGQASEWAL
LRRHSSEDLFGVQICGAYPDTIARTVELIEKECTVDFIDINMGCPIDIVVDKGAGSFLLT
KPLRMKGIIQAASGTVDKPITVKVRTGYFGGKNRIDSLIADIGSWGATALTIHGRSRQQH
YSKLADWDYIYQCAQKAPCTLQVLGNGDIFSYLDWNNRKTDCPELSTCMIARGALIKPWL
FTEIKEQRHWDISSQERLNILKEYVRFGLEHWGSDKKGVETTRHFLLEWLSYACRYIPVG
LLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAY
DRAENG
NT seq 2181 nt   +upstreamnt  +downstreamnt
atggatgactgtccgaaagatatctgtgcggttacagactcttcgacggaaggggtcccg
gcttcacagccgcctttggacccggatggaactactcaacgttcaccggaagagttagta
gctcgagccattgcaccagtaaagcgagagtttcttcgacctccaccatcctctagaacc
acccaaaacaaccccgcctctgacgccaacgtcaagcaacctcaggcaaaccttgtccag
gaaaagaaatcgaagcggcaactcaaacgagagcgtcgtcaggagcaaaaatctcctttg
aatctatgtcctgagatagcaaagacgggagatgtcaatgcatgttcttataaagataaa
tgtcgtttcagccatgacattgaagcctttatggctcagaaaccggctgatctagagggt
gactgcccatttataaaagctgatgcaccctgcccttatggtttagcctgtagatttgca
ggcacgcataaggataatgctcccgctgctacttctaatttattgaagaaaagctctgaa
gtcaatggactaagcaaagatgttcagaagcttttgtggaaaaacaaaatgcgctttact
aaagcggatgttgtagttaaatctcttggactagcggggcccaactggaaagtaaagaag
ctggtagataaggaggaagacgaagttggattagatggttctcatgctgccgataagacc
gattgcaaaaaggtggttgatgattcagttgactgttctgagtgtccttcaacatttcca
gcagcagttaatgctgaggaggcatgtgaaactgataagttgagacccttgaagaaggcc
aagttagtggttgatgaaaagagctctgatgaaggggaaggtgcaactgttttggagaag
gataatgaaaaaaattctgctgaaactgaaccggcagataatgtacttgcagaacctgat
aggagccccaagatatctaatttgaaagatgcgactgttcttgagaagtataatgaaaaa
aaatctgctgaaactgaaccagctgatgatgtacatgcagaacctgataagagcctcaag
atacaccctcgtgaaaagatgcttattgattttagagagaagttgtatcttgctcctcta
accacagttgggaatcttccttttcgtagggtttgcaaaacactgggagcagatgtgaca
tgcggtgaaatggcaatgtgcaccaaccttttgcagggtcaagcttcagaatgggctctg
ctgaggcgacattcatccgaggatttgtttggagtccagatatgtggggcatatcctgac
actatagcacgtactgttgaacttatagaaaaggagtgtacggtggacttcattgacatt
aatatggggtgtccaattgatattgttgttgataagggtgctggatcttttcttctcaca
aaaccattacgtatgaaaggaatcattcaagcagcttctggcactgtagataaacctata
actgttaaggtgagaacaggttattttggaggtaaaaaccgcattgattcgctaattgca
gatattggcagttggggtgctactgcattgacaatacatggtcgatcacgtcagcaacac
tacagtaaacttgctgattgggattatatataccagtgtgctcagaaggccccttgtaca
ttgcaagttttgggtaatggagatattttctcatatttagattggaacaatcgtaaaact
gactgccctgagctttctacgtgtatgattgctcgaggggcattgattaagccttggtta
tttactgaaatcaaggaacagaggcactgggatatcagttctcaggagcggttgaatatt
ctgaaggagtatgtacgttttggcctcgaacattggggatctgacaaaaagggtgtggaa
acaactaggcatttcttgttggaatggcttagctatgcatgtaggtatattcctgttggt
cttttagatgtcatcccccaacgtctgaattggcgacctccctcatactatggacgagat
gatcttgagacgctaatggcctctgattctgcagctgactggatccgtatatctgaaatg
ctgcttggcaaggttccagatggtttcacattcgcaccaaagcacaaatccaatgcttat
gatcgtgcagaaaatggctaa

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