KEGG   Gossypium hirsutum (upland cotton): 107920326
Entry
107920326         CDS       T04793                                 
Name
(RefSeq) transcription factor ILR3
  KO
K28357  basic helix-loop-helix transcription factor family protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ghi03000]
    107920326
Transcription factors [BR:ghi03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    107920326
SSDB
Motif
Pfam: bHLH_IRO3 HLH CCDC113_CCDC96_CC LRRFIP HAUS-augmin3 Cluap1 YabA PI3K_P85_iSH2 DUF3450 ERM_helical Tektin TMF_DNA_bd DUF4140 HAP1_N FBF1 Leu_zip DUF4666 Nup54 AAA_23 ATG16 Cgr1 GAS AAA_13 Rootletin APG6_N MAD KASH_CCD ZapB TPR_MLP1_2 Mis12 YwqH-like COG6_N CENP-F_leu_zip Spc7 EMC3_TMCO1 DUF3740 SKA2 DUF4407 DUF7801 UPF0242 DUF7491 WXG100 Seryl_tRNA_N BRE1 V_ATPase_I Tho2 TMPIT COG3_N Uso1_p115_C FapA DUF4337 Macoilin PCRF Ax_dynein_light FlxA MG280 Prominin
Other DBs
NCBI-GeneID: 107920326
NCBI-ProteinID: XP_016705472
UniProt: A0A1U8KSM8
LinkDB
Position
D13:complement(51003804..51006918)
AA seq 238 aa
MVPPENPSYWSHFDYSTLIDDIPVPDGPYTGFSWSTQPTNAPSTAVNVEVDNSFGDLDGL
TESGSKKRGRSESCNPSSSKACREKLRRDRLNDKFMELGAILEPGRPPKTDKSAILVDAV
RMVTQLRDEAQKMKDSNSSLQERIKELKAEKNELREEKQRLKAEKEKLEQQLKTMNAQPS
FMPPAPAIPSAFAAAAQGQAHGNKLVPFFGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
NT seq 717 nt   +upstreamnt  +downstreamnt
atggtgccccctgaaaaccccagttactggtctcacttcgactactcaaccttgatcgac
gatatccctgttcccgacggaccttacaccggtttttcttggtccacgcagccaaccaac
gctccttctactgctgtcaatgtggaagttgacaactcgtttggggatctggatggcctt
acggaatctggttcaaagaagaggggtagatctgaatcatgcaacccttctagctccaaa
gcatgtagggagaagttgcgtagggataggctaaatgacaagtttatggagctgggagct
attttggaacctggaaggcctcccaaaacagacaagtctgctattttggtggatgctgtt
cgaatggtgacccagttacgagatgaagcccaaaaaatgaaggattcaaattcaagtctc
caggaaaggattaaagagttaaaggctgagaagaatgagcttcgtgaggaaaagcagagg
ctgaaagccgagaaggaaaagctggagcagcaactcaaaaccatgaatgcacaacctagc
ttcatgcctcctgcaccagcaatcccttctgcatttgctgctgctgcccaaggtcaagct
catgggaacaagttggttcctttctttggttatccaggagtggcaatgtggcaattcatg
ccacctgcagcagtggatacctcacaggatcatgtactccgccctccggttgcataa

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