Gossypium hirsutum (upland cotton): 107920442
Help
Entry
107920442 CDS
T04793
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107920442
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
107920442
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107920442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
107920442
NCBI-ProteinID:
XP_040939083
LinkDB
All DBs
Position
A12:94537504..94542289
Genome browser
AA seq
503 aa
AA seq
DB search
MEVRSENNIQVRCDKIPSQLIPRTRLQVWFFRVCSSILLWTCLIQLLAVCELWHPRLLTG
LTNRIPWTSRPPLRLQHSLHSPPPLPPPRNYRSNGFLKVSCNGGLNQMRAAICDMVIVAR
LLNLTLVVPELDKTSFWADPSDFGDIFDVSHFIDSLRDEVRIIKRLPKKFSRKYGFQAFQ
MSPVSWSNEKYYLEQILPLFSKHKVVHFNRTDTRLANNGIQLDLQKLRCRVNFQGLKFTP
EIETLGYKLVRILQDKGPFVALHLRYEMDMLAFSGCTHGCTVEEAEELKRLRYAYPWWRE
KEIMSEERRQQGLCPLTPEEATLVLQALGFDKETQIYIASGEIYGSERRLASLRAAFPHI
VKKETILDPAELQQFQNHSSQMAALDFMVSVASNTFIPTYYGNMAKVVEGHRRYLGFKRS
VLPDRKKLVELLDLHQNGTLPWNDFALAVRQVHEKRMGQPFRRRIIPDKPKEEDYFYANP
EECLCEGTKCEDLVGPSNSSTLH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggttagatcagagaataatatacaagtgaggtgcgacaagattcctagtcaactg
attcctaggactcgtcttcaggtctggttctttagagtttgttccagcattttgctttgg
acttgtttgattcagctccttgccgtctgtgagttatggcacccgcgtttgcttactggt
ttgaccaatcggattccctggacctctcgccctcctcttcgtcttcaacactcgctccat
tccccgcctcctcttcctccccccagaaactatagaagtaatggttttctcaaagtttca
tgcaatgggggcttgaatcaaatgcgtgctgcgatctgtgacatggtaatcgttgctcga
cttttaaatctcactttggttgttccagaacttgataagacatcattctgggcggaccct
agtgattttggtgacatttttgatgtgagccatttcattgattctctaagggatgaagtt
cggattatcaaaaggctgccaaagaagtttagtaggaaatatgggtttcaagcttttcag
atgtctcccgttagctggtcaaatgaaaagtactacttagaacagattcttcccctgttc
agtaagcataaggtagtgcacttcaatcgaactgatacacgactggcaaataatgggatt
caacttgatcttcagaaacttaggtgccgtgtgaatttccaaggactgaaatttactcct
gagattgagacattggggtacaaattggttcgcatactccaagataagggaccctttgtg
gcattgcatctaagatatgagatggacatgttggctttctcaggttgcacgcatggctgc
accgttgaagaagctgaggagctaaaacgattgaggtatgcatacccttggtggagagag
aaagagataatgtctgaagagaggagacaacaagggttgtgtcctctgacacccgaagaa
gcgacgctagttttgcaagcattaggtttcgataaggaaactcagatttacatcgcttct
ggtgagatttatggcagtgaacggagattggcatcgctaagagctgcatttccacacatt
gttaaaaaggaaacaatattagatcctgcagaactgcagcaatttcagaaccattcatct
cagatggcggctttggactttatggtatcggttgccagcaatacattcattccaacatat
tatgggaacatggcaaaagttgtagaaggtcatcgcaggtatcttgggtttaaaagaagt
gtcctgcctgatcgaaagaaactcgttgaattgctggatttgcatcagaacgggacactt
ccatggaatgattttgcactggctgtaaggcaagtgcatgagaaacggatgggacaaccc
ttccgtcgtcggataattccagacaaaccaaaggaggaagattatttctatgcaaaccct
gaagagtgcctttgtgagggaacaaagtgtgaagatttggtaggccctagtaactcaagt
acactacattaa
DBGET
integrated database retrieval system
