Gossypium hirsutum (upland cotton): 107920480
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Entry
107920480 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107920480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107920480
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107920480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
AAA_16
AAA_2
RuvB_N
AAA_22
DUF815
AAA_14
AAA_7
PhoH
Mg_chelatase
AAA_11
AAA_33
LMNTD2_N
AAA_24
RNA_helicase
ATPase
Motif
Other DBs
NCBI-GeneID:
107920480
NCBI-ProteinID:
XP_016705703
UniProt:
A0A1U8KXA1
LinkDB
All DBs
Position
D13:38315534..38318720
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AA seq
423 aa
AA seq
DB search
MATAMVEDSSFEEDQLASMTTEDIVRASRLLDNEIRILKEEMQRTNLELDSYKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGIRPPKGXLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
YYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgctatggtagaagattctagctttgaagaagaccagctggcttccatgact
accgaggatatcgtccgagcttcccgtcttcttgataacgagattcgtattctcaaggag
gagatgcaaaggacaaatctcgagttggattcatacaaggaaaagattaaggagaatcaa
gagaaaattaagcttaacaagcagttgccttacttagtcggcaacattgttgagatattg
gagatgaaccctgaagatgaggcagaggaggatggtgccaacatagatctagactcacaa
aggaagggtaaatgtgttgtgctgaaaacctctactcgtcagaccatctttctacctgtg
gttggacttgtagaccctgataaattgaaacctggtgatttggttggtgtcaacaaagac
agctacttgatattggatactttgccatctgagtacgactccagagtaaaggctatggag
gttgatgagaagccaactgaggactacaatgatattggtggcttggagaagcagatccaa
gaactagttgaggccattgtgttgcccatgactcataaagaaaggtttcaaaagttaggc
attcgtccacctaaggggntgctcttatatggacctcctggcactggaaaaaccttgatg
gcccgtgcttgtgcagcacaaacaaatgccacgtttctgaagctagcaggcccacaactg
gttcagatgtttattggagatggagcaaaacttgtccgtgatgcttttcagcttgcaaaa
gaaaagtctccatgcatcatttttatagatgaaattgatgcaattggcacgaagcgtttt
gatagtgaggtgagtggggatagggaggttcagcgaacaatgttggaactgcttaaccag
cttgatggctttagcagtgatgaacgcattaaggtcatagcagcaactaaccgagctgat
atccttgaccctgctctgatgcgttctggtcgattggatcgtaaaattgagttcccacat
cccactgaagaagcaagagctcgaatccttcagatccactcaaggaagatgaacgttcat
ccagatgtcaattttgaagaacttgctcgatctacagatgatttcaatggagcacagctg
aaagctgtttgtgtggaggcaggcatgctagctcttcgccgcgatgcaactgaggtgaac
catgaagattttaatgaaggcatcattcaggtgcaagctaagaagaaggcaagcctaaat
tactatgcataa
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