Gossypium hirsutum (upland cotton): 107920530
Help
Entry
107920530 CDS
T04793
Name
(RefSeq) probable catabolite repression protein creC isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107920530
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107920530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Pep3_Vps18
Cytochrom_D1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
107920530
NCBI-ProteinID:
XP_016705765
UniProt:
A0A1U8KTI3
LinkDB
All DBs
Position
D13:2474559..2484239
Genome browser
AA seq
546 aa
AA seq
DB search
MINTANGMISTPSSSANAQSPGLKTYFKTPEGRYKLHYEKTYPSGLLHHSHGKTVTQVTL
AHLKEKPAPSTPTASSSSFTASSGVKSAAARWLGAGNGSRALSFVGGNGSSKSVSSAGRI
GSLGSSSPSNSMTNTNFDGKGTYLIFNVSDSIFISDLNSQDKDPIKSIHFSNSNPVCHAF
DQDAKNGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSVNNSSRCTSIAWIP
GGDGAFVVAHADGNMYIYEKNKDGAGDSSFPVIKDQTQFSVAHARYSKSNPIARWHVCQG
SINSIAFSSDGACLATVGRDGYLRVFDYSKEQLVCGGKSYYGALLCCAWSMDGKYILTGG
EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSDGTGETVMYRFGSVGQDTQL
LLWDLEMDEIVVPLRRCPPGGSPTFSTGSQSSHWDNVCPLGTLLPAPSIRDVPKISPLVA
HRVHTEPLSGLIFNPGSVLTVCRQGHIKVWMRPSGAESQSSNSETVSGSKDKPLVSNTLG
STSHKQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacagccaacggtatgatttcgacaccgtcttcatcggcgaacgctcaatcg
ccgggtttgaagacttattttaaaactccagaaggtcgatataagcttcactatgaaaag
acttacccttctggccttcttcaccattctcatggcaaaactgttactcaggttacctta
gcgcatctgaaagagaagccagctccatcaactccaacagcttcatcttctagtttcacc
gccagcagtggggtaaaatcagcagcagcgaggtggctaggtgcggggaatgggagccgt
gcactcagctttgttggagggaatggtagtagtaaaagtgttagcagtgctggcaggatt
ggatcattgggttcttcgagtccgagtaattcaatgactaatacaaattttgatgggaaa
ggaacttatttaatcttcaatgtcagtgattctatttttattagtgatttgaattcgcag
gataaggatccaataaaatctatccatttcagtaattcaaaccctgtctgccatgccttt
gatcaggatgccaagaatgggcatgatttgcttattgggttgaattccggtgatgtttat
tcagtgtcattgagacagcagttgcaagatgttggaaagaagcttgttggggcacagcac
tacaataaagatggttctgtaaataacagcagtcgatgtaccagtattgcatggatcccc
ggaggtgatggtgcttttgtggttgcccatgctgatggaaatatgtacatatatgaaaag
aacaaggatggtgctggtgattcttcattccctgttatcaaagaccaaactcaattttct
gttgcgcatgcacgatacagtaagagcaacccaattgcgagatggcatgtatgtcaaggt
tcaattaatagcattgctttctcctctgatggggcctgcttagcaaccgttggaagagat
ggttatctgcgagtttttgactattcaaaagaacagctagtttgtggtggcaaaagctat
tatggtgctctactatgttgtgcttggagtatggacgggaaatatattctgactggaggt
gaagatgacttggttcaagtttggagtatggaagatcgaaaggttgtggcatggggtgag
gggcacaactcatgggttagtggagtggcattcgattcttattggtcatcgcctaattca
gatggcacaggggagactgtcatgtaccgctttggttctgttggtcaggatacacaattg
ttattgtgggacctggaaatggatgaaattgttgtgccattgcgtcgatgccctcctggt
ggatctcccactttcagcactgggagccaatcttcccactgggacaatgtatgcccactg
ggtaccctgctacctgccccaagcattcgagatgttccgaaaatttcaccactggttgct
catcgtgttcatactgaacctctctcaggcttgatttttaacccgggatccgtacttact
gtttgtcgacaggggcacataaaagtctggatgagacccagtggtgcagaaagccaatca
agcaacagtgaaactgtatccggttccaaggataaacctttagtttccaacacacttggc
agtactagccataaacaatga
DBGET
integrated database retrieval system
