Gossypium hirsutum (upland cotton): 107920533
Help
Entry
107920533 CDS
T04793
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107920533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107920533
03036 Chromosome and associated proteins [BR:
ghi03036
]
107920533
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107920533
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
107920533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
107920533
NCBI-ProteinID:
XP_016705768
UniProt:
A0A1U8KXK2
LinkDB
All DBs
Position
D13:37096913..37105064
Genome browser
AA seq
1201 aa
AA seq
DB search
MDEANNNSIANNVARAIVAAFDWNSTPDARKAAVSYLESIKAGDIRVLANTSFCLVKKDW
SSEIRLHAFKMLQHLVRFRWEDFGPLEHRNFANATFELMSEIADNCEEWALKSQTAALVA
EIFRREFLNLWQELLPSLVSLSSKGPVQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPEILPLLYTLLERHFGAAMNEVGRQQLDIAKQHAAAVTATLNAVNAYAEWAPLS
NLSKYGIIHGCGFLLSSPDFQLHACEFFKLVSPRKRPVDDSASDFDSAMISIIQILMNVS
REFLVRSSPAGGAIDESDYEFVEYVCESMVSLGSSNLQCIVGDSTTFSLYLQQMLGFFQH
FKLALHYQSLQFWLVLLRDAMSKPKLSVHSSGDGLTATNVDSTLAQVDEEKRKILSFLND
GICSTILDISFQRMLKKEKLMTETALSPGILELWSDDFESKGDFGQYRSRLFELIKFIAS
NKPLVAGAKVSVRIIMIIKSLLNSPMPAQDLAMMESMQMALENVIISIFDGSNEFAGGSS
EVHLALCRIFEGLLRELLSLNWTEPALVKVLGHYLEAMGPFLKYFPDAVASVINKLFELL
NSLPFIVKDPSTSSARHARLQISTSFIRIAKAADKSILPHMKGIADMMACLQREGRLLRS
EHNLLGEAFLVMASTAGIQQQQEVLAWLLEPLSQQWMQIEWQNNYLSEPLGLVGLCSERA
FMWSLFHTVTFFEKALKRSGTRKGNSNLQNSSTAISTPHPLASHLPWMLPPLLKLLRGIH
SLWSPSVFQMLPGEIKSAMSMSDVEQSSLLGGGNPKLSKGALTFVDGSQFDTNKEGYIKP
NEADIRNWLKGIRDSGYNVLGLSTTIGDPFFKCIDIDIVALTLIENIQSMEFRHTRLLVH
SILIPLIKSCPLDMWEVWLERLLHPLFVHCQQALSCSWSSLLHEGRANVPDNHGILTGSD
LKVEVMEEKLLRDLTREICSLLSTIASSGLNASLPSLEHAGHVGHVDTSSLKDLDAFASS
SMASFLLKHKSLAIPVLQISLEAFSWTDSEAVTKVCAFSAAVVLLAIFTNNVDLREYVSR
DLFSAVIQGLALESNAVISADLVSLCRDIFIYLCNRDPGPRKILLSLPCISPNDLHAFEE
ALTKTASPKEQKQLMKSFLLLATGNNLKALAAQKCVNIITNVTGHVVQSMLQKIESMRGK
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagccaacaacaacagcatagcaaacaatgtggccagagccattgttgctgct
tttgattggaactccactcccgatgctcgcaaagctgccgtttcttaccttgaatccatt
aaagcaggagatatacgggttttggcaaacacatcattctgtttagtgaaaaaagattgg
tcttcagagattcgcttgcatgcatttaaaatgctacagcacttggttcggtttcggtgg
gaggactttggtcctttagaacatagaaactttgcaaatgctacttttgagttaatgtca
gaaattgcagacaattgtgaagaatgggctttgaaaagtcaaactgctgcacttgttgct
gagatttttagaagagaatttctaaatctttggcaggagctgcttccctctcttgtttcc
ctatccagcaaaggccctgtacaagctgaattggtctccatgatgctgagatggctacct
gaagatattacggtccacaatgaagatttggaaggtgatcggcgtaggttactgttacgt
gggcttactcaatctttgccagaaattttgccactactgtacactttactggaaaggcat
tttggagctgcaatgaatgaggtgggtagacaacaacttgatattgcaaaacagcatgca
gctgctgtaacagctactttaaatgctgttaatgcctatgctgaatgggctcctttgtcc
aatctttctaaatatggcatcattcacgggtgcggttttctactttcttctcctgatttt
cagcttcatgcttgcgagtttttcaaacttgtctctccaagaaagagacctgtggatgac
tctgcttccgacttcgattccgcaatgattagcatcattcaaatcttgatgaacgtatcc
cgagaatttttggtcagatctagcccagctggtggggctatagatgaaagtgactacgag
tttgtggaatatgtatgtgaaagtatggtgtctttgggttcctcaaacttgcaatgtatt
gttggagatagcactacattctcactctatttacagcagatgcttgggttttttcaacat
tttaagctagctcttcattaccaatccctgcaattttggttggtgctgttgagggatgca
atgtcaaagccaaagctttcagtacattcatctggagatgggttgactgctaccaatgtg
gactctactttggctcaggttgatgaagaaaagagaaagattttaagttttctgaatgac
ggtatttgtagtacaattctcgatatatctttccaacgcatgcttaagaaagaaaagctc
atgactgaaacagccctttctccggggattttggaattgtggagtgatgattttgaaagc
aagggtgattttggccagtaccgttctaggctgtttgagttaatcaagtttattgcgtca
aacaagcctcttgtggctggtgctaaagtttccgtaagaattattatgatcattaagagc
ctcttgaattctccaatgccagctcaggacttggctatgatggaaagcatgcaaatggct
cttgaaaatgttatcatctctatttttgacggatcaaatgagtttgccgggggtagttca
gaagttcacctggctttatgtagaatatttgaaggattacttcgggaacttctttctttg
aattggactgagccagcccttgtgaaagtacttggccactatctagaagcaatgggtccc
ttcctcaagtattttcctgatgcagttgccagtgtcatcaataagctttttgagctccta
aattcacttccttttattgttaaggatccttcaacgagcagtgcacgacatgcaaggttg
cagatttctacgtcatttattcgaatagcaaaagctgctgataaaagtattctgcctcat
atgaagggtattgctgatatgatggcatgtttgcaaagagaaggtcgtttgcttcgtagt
gaacataatcttcttggtgaagcatttcttgtcatggcttctactgcagggattcaacag
cagcaagaagttttggcatggttactcgaacctttgagccaacagtggatgcagatagag
tggcaaaataattacttgtctgaacctcttggtctagttggtttatgctctgagagagca
tttatgtggtcacttttccacactgtgacattcttcgagaaagcacttaagaggagcgga
acaaggaaaggcaattctaacttacagaacagctcaacagcaatttctactccacatcca
ttagcttctcatctgccgtggatgcttcctcctctcttaaaactgcttcgtggtatacat
tccctttggtcaccatctgtattccaaatgttacccggagaaatcaaatcggcaatgagc
atgagtgatgtggaacaatccagtcttcttggtggtgggaacccaaaattgtcaaagggt
gcattaacttttgtagatggatctcagtttgatacgaataaggaaggatatatcaaacca
aacgaggctgacatacgaaattggctaaagggtattcgagacagtgggtacaatgtattg
ggcctatctacaaccatcggggatccgtttttcaagtgcattgacattgatattgttgct
ttaactctaatagaaaatatacagtcaatggagttcagacatacacggctgcttgttcat
tctattttgattccgctaattaagtcctgtcctctggacatgtgggaggtatggcttgaa
aggctactgcacccattatttgttcattgtcagcaagctctaagctgttcatggtccagt
cttttgcacgaaggccgagcaaatgtccccgataatcatgggattctcaccgggtctgac
ttgaaagtggaagtaatggaggagaaactgcttcgagatttaactcgtgagatatgttca
ctcctctctactatagcatcatctggattaaatgccagccttccttcgttagaacatgct
ggccatgttggccacgtcgacacatcttctctgaaagatttggatgcatttgcttcgagc
tctatggccagtttccttttaaagcacaagagcctggcaattccagtgttgcagatttct
ttagaagcattttcttggaccgacagtgaagcagtgaccaaagtttgtgctttctctgct
gctgtagttcttctagctatatttacgaataatgtggatctcagggaatatgtttcgaga
gatctattttctgctgtcattcaaggtctggcccttgagtcaaatgctgttatcagtgcc
gatcttgttagtctctgtcgtgacatattcatatatctatgtaacagagatccaggcccc
aggaagattttactctccctcccatgtattagccccaatgacttacatgcctttgaagaa
gccttgacaaagacggctagtccgaaagaacaaaagcagcttatgaagagcttcctttta
ttagctaccgggaacaacttaaaggctcttgctgctcagaaatgtgtaaacattataaca
aatgttacaggccacgtagttcagtcaatgctccagaaaatagaatcgatgagggggaaa
ctgtag
DBGET
integrated database retrieval system
