Gossypium hirsutum (upland cotton): 107920664
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Entry
107920664 CDS
T04793
Name
(RefSeq) protein argonaute 7 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107920664
03036 Chromosome and associated proteins [BR:
ghi03036
]
107920664
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107920664
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107920664
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107920664
microRNA pathway
RISC loading complex
107920664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3734
TBCC_N
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
107920664
NCBI-ProteinID:
XP_016705967
UniProt:
A0A1U8KU09
LinkDB
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Position
D13:15076464..15080302
Genome browser
AA seq
1007 aa
AA seq
DB search
MEESEEHHGSKECSAKTRAFKGINNSPHKHHYYQHHHPWLQYSGHYGFFNQNQLQSYSYY
PSLLPLPPPIPLQLALPPPLSQNHTFQPKTHLQQLSISNTKFPVSSMTPAAQEGLQWRKS
LPSKASDGIKMRNATKEALVVARRPDSGGVEGPVISLLANHFLVKFDPSLKVYHYNVEIS
PNPSKEVARMIKQKLVESNSGLLCGAHPAYDGRKNFYSPVEFQNGKLEFFVSLPIPTANT
GSPFGEWNGFQQKQNQLKVFRINIRAVSKFDGKDLSSYLSNESDDWIPLPQDYLHALDVV
LRESPMEKCICVGRSFYSSSTGGTKEIGGGAIGWRGFFQSLRPTQQGLALNVDSSITAFH
ESIGVIPYLQKRIDFLRDLTQRKTRSLSDDERKEVEKALRNIRVFVCHRETVQRYRVYGL
TEEATENLYFADRDGKNLKLIDYFKDHYNYNIQFRNLPCLQISRSKPCYLPMELCMICEG
QKFLGKLSDDQTARILKMGCQRPKERKAMIDGIVRGPAGPTSGNQAEEFKLHVSKEMSRL
NGRILQPPKLKLGDGGHVRVITPSRRDRQWNLLNSHVFQGTRIERWALISFGGTQEQKSN
LPKFINQLSRRCEQLGIFLSKSTVVSPQFEPTQVLNNVTLLESKLKKIHRAASNNLQLLI
CIMEKKHKGYADLKRIAETSVGFVSQCCLYPNLGKLSSQFLANLALKINAKVGGSTVALY
NSLPSQIPRLFRLDEPVIFIGADVTHPHPLDDSSPSVAAVVGSMNWPAANKYVSRMRSQT
HRQEIIQDLAAMVEELLDDFYQEVNKLPKRIIFFRDGVSETQFYKVLKEELQAVKEACAR
FPGYKPPITFAVVQKRHHTRLFPFEINPSSNQNQHFDENIPPGTVVDTVITHPREFDFYL
CSHWGVKGTSRPTHYHVLWDENRFTSDELQKLVYNLCYTFARCTKPVSLVPPAYYAHLAA
YRGRLYLERSESVAFTRSSNIISRVTPPKTTPLPKPSENVKKLMFYC
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcagaggagcaccatggcagcaaggaatgcagtgctaaaaccagggctttc
aagggcataaacaacagccctcataagcatcattactaccaacaccaccacccatggttg
caatactcaggtcactatggcttctttaaccaaaaccagctccaaagctactcttactat
ccttctttgcttcctttacctcctccaatacctttgcaactggctttacctccacctctc
tctcaaaatcatacctttcaaccaaaaacccatttgcagcaactttcaatctctaatacc
aaattcccagtttcttctatgacaccagcagctcaagaggggcttcaatggagaaaaagt
ttgccatccaaagcaagtgatggaataaagatgaggaatgctacaaaggaagcactggtg
gttgcaaggagaccagattctggtggtgtagaagggcctgtaatctctctccttgccaac
catttcctagtaaaatttgatccttctctaaaagtttaccattataatgttgagatatcc
cctaatccctccaaggaggttgctaggatgatcaagcagaaactggttgaaagcaactca
ggtttgctttgtggtgctcatccagcctatgatggtaggaagaatttttatagccccgtt
gaattccaaaatggtaagcttgagttctttgttagtctcccgatccccactgcgaataca
ggttcgcctttcggggaatggaatggctttcaacaaaaacagaatcagctcaaagtgttt
agaatcaatatcagggctgtttccaagtttgatggaaaggatttgagtagttacttgagc
aatgaaagtgatgattggatcccacttcctcaagattatctgcatgctttggatgttgtt
cttagggagagtccaatggagaagtgtatatgtgtagggaggtcattttattcaagttcc
acgggaggtactaaggaaataggaggaggagctattggatggagaggtttctttcagagt
cttcgaccgacgcaacaaggactcgctctcaatgttgattcctcgatcaccgccttccat
gagagtatcggagtaatcccttacttgcagaagcggatcgactttcttcgagaccttact
caaaggaagacaaggagtttaagtgatgatgaaaggaaggaagtggagaaagcattgaga
aatattagggtctttgtttgccatagagaaacagtccaaagatatagagtttatggctta
actgaagaagccactgaaaacctttactttgcagatagggatggaaagaatttgaagctt
atcgattactttaaagatcactacaattataatatacaattcaggaatttgccatgcttg
cagatcagtaggagcaaaccatgctatcttccaatggagctttgtatgatttgtgaaggc
cagaaatttctggggaagctttctgatgatcaaactgcaaggattcttaaaatgggttgc
caaagaccaaaagagcgaaaagccatgattgatggaatcgtgaggggacctgcagggcct
acaagtggcaaccaggctgaagagttcaagctccatgtttcgaaagaaatgagtcggttg
aatgggaggattcttcaacctcctaagcttaagctcggtgatggtggacacgtaagagtt
attactccttcccgccgtgaccggcagtggaaccttctcaacagccatgtctttcaggga
acacggattgaacgttgggcacttataagttttgggggcactcaagaacaaaagtctaac
cttcctaaattcataaaccagctatctcgaaggtgtgagcagcttggtatcttccttagc
aaaagcacagttgttagcccccaatttgaaccaactcaggtgcttaataatgtgacactt
ttggaatctaagctcaagaaaattcatagagctgcctcaaacaatctccaactgctcata
tgtataatggagaaaaagcacaaagggtacgctgatttgaaacgaatagccgagacaagt
gtaggatttgtgagccagtgctgcttatacccgaacctcgggaaattgagttcacagttt
ctggcaaatttagcccttaagattaatgccaaagttggaggttccactgttgctttgtac
aattcattaccttctcagattccacgacttttcaggctagatgagcctgtgatctttatc
ggtgctgacgtgactcatcctcacccgcttgatgattccagcccatcggttgctgctgtg
gttggtagcatgaactggcctgcagcaaacaagtatgtatcgaggatgagatcacaaaca
catcggcaagaaatcattcaggatcttgctgcaatggtagaagaactactggatgacttc
taccaagaagtaaacaaactcccgaagagaataatcttcttccgagacggtgtaagtgaa
actcaattctataaggtgcttaaagaggaactacaagctgtcaaagaagcttgtgcaaga
tttccaggctacaaacctcccattacttttgctgtagttcaaaagaggcaccataccagg
ttgttcccatttgaaatcaatccttcttccaatcaaaaccaacatttcgatgaaaatatt
cccccggggacggtagtggatacggtgataactcatccaagggaattcgatttctatctt
tgcagtcattggggggtaaagggtactagccgccccacccattaccacgtattgtgggac
gaaaaccgattcacttctgatgaactgcagaagctggtttacaatctatgctacactttt
gcaaggtgcaccaagccagtttcattggtccctcctgcttactatgctcacttggctgca
tacagaggcaggctttaccttgagcggtcagaatccgtagcttttacgagaagctcaaac
ataatctctcgcgtaactcctccaaagacaacgcctctaccaaaacctagcgagaatgtt
aagaagctcatgttttactgctaa
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