Gossypium hirsutum (upland cotton): 107920803
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Entry
107920803 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107920803
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
107920803
NCBI-ProteinID:
XP_016706148
UniProt:
A0A1U8KYL0
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Position
D13:5067344..5070227
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AA seq
602 aa
AA seq
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MAVDSPLSSPLGPPACEKDAKALQFIEEMTRNAESVQQRVLAEILSRNAQTEYLTRFQLN
GATDRETFKSKLPVITYEDLQPEIHRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRQLLYSLLMPVMNLYVAGLDKGKGLYFLFVKSEIRTPGGLLARPVLTSYYKSD
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLLDRHQVLRLGAVFASGLLRAIRF
LQLNWRQLAHDMETGSLNSKITDPSLRECIVKTLKPNPELAQFVRHECSKDDWEGIIVRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNLNLMCKPSEVSYTI
MPNMAYFEFLPHEPNLDSTGFDFTHELPPKLVDLVDVEVGKEYELVITTYAGLCRYRVGD
ILRVTGFHNSAPQFHFIRRKNVLLSIDSDKTDEAELQTAVENASHLLREHNASVVEYTSH
ADTKTIPGHYVVYWELLVKDSTNSPDNDTLEQCCLAMEESLNSVYRQGRVADNSIGPLEI
RVVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSAHFSPALPHWSPER
SQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgattcacctctctcgtctccgctaggtccgccggcgtgcgagaaagatgcg
aaagctttgcagttcatcgaggaaatgactcgaaatgccgagtccgttcaacagagagtc
ctcgctgaaatcttatcccgaaacgcacagactgagtacctcacacggttccaactcaac
ggtgcaaccgaccgagaaactttcaagtccaagctcccggtcattacttacgaggacctt
cagcctgaaatccatcgtattgctaatggcgaccgctctgctattttatctgcccacccc
atctcagaattcctcaccagctccgggacatcagctggtgagaggaaactcatgcctaca
attaaagaagagctagatcgccgtcagttgctttacagtttgctcatgccagtgatgaat
ctttatgtggcaggcttggacaaaggcaagggcctatatttcttgtttgtgaaatcggag
ataaggacccccggtggtctcttggctcgccctgtcctcaccagctactacaagagcgac
catttcaagactcgcccttacgatccttacaacgtttacaccagccccaatgaggccatc
ctctgtcccgactcgtttcagagcatgtacacccagatgctctgtggcctccttgaccgc
caccaagttcttcgcctcggcgcggtcttcgcttctggactcctccgtgcaatcaggttc
cttcaactcaactggcgacaactcgcacatgatatggaaacgggttccttgaactcgaaa
atcactgacccttcattgagggaatgcattgttaagaccctaaaacctaaccccgagctt
gcccagttcgtccgccatgagtgttcgaaggatgattgggaggggatcattgtaagaatt
tggcctaacacgaaatatctcgacgtcattgtaaccggagctatggcgcagtatattcca
acccttgattattatagtggtgggttacctttggcttgcaccatgtatgcttcatctgaa
tgttactttggtttgaaccttaacctcatgtgtaaaccgtcggaagtttcttataccatc
atgcccaacatggcgtacttcgagttcttaccccacgagcctaatcttgactcaactggt
ttcgatttcactcatgaattgcctcctaaactcgtcgacctcgtggatgtggaagttggg
aaagaatatgagctcgtgatcacaacctatgcggggctatgcaggtaccgagtgggcgac
attcttcgcgtcaccggtttccacaactcggccccgcaattccatttcatcaggaggaaa
aatgtgttgctcagcatcgactcagacaaaaccgacgaggctgagctgcaaacggcggtc
gagaatgcttctcacctcctccgtgagcacaacgccagcgtagtggagtacacgagtcac
gccgatacaaaaacaatccctggtcattacgtagtatactgggaattgttggtgaaagac
tcgaccaactccccagacaatgataccctagaacaatgttgtttagcaatggaagagtca
ctgaactcagtataccggcaagggcgagtggcggataactcgatcggaccgctagaaatc
cgagtggtaaaaaacgggacgtttgaagagttaatggattacgcaatatcaagaggagca
tccattaatcaatacaaggttccaaggtgtgttagtttcaccccaatcatggagttgttg
gattctagggtggtgtctgcacattttagcccagctttgccacattggtccccagaaaga
agtcaatga
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