Gossypium hirsutum (upland cotton): 107920831
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Entry
107920831 CDS
T04793
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107920831
Membrane trafficking [BR:
ghi04131
]
Autophagy
Other autophagy associated proteins
Others
107920831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT140_2nd
BCAS3_WD40
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_2nd
Ge1_WD40
Beta-prop_IFT80_2nd
Beta-prop_IFT122_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
107920831
NCBI-ProteinID:
XP_016706189
UniProt:
A0A1U8KZI8
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All DBs
Position
D13:complement(38184746..38187165)
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AA seq
389 aa
AA seq
DB search
MSSSDDTLPHPQAECSSPPPNQSQIQLPLLIHQLSFNQDNTCFSAVTDRGFFVFNTEPYR
PLICRDFESGLSLLSMLFRFEVFVLVGSSYSPSPSAAAANTKALLWDDHASRCIGELSFR
SPIRSIRLRRDTIVVILLHKIYLYNFSDLKLLHQLETTSNPKGLCEVSQISGPMLLVCPG
LQKGSVRVENYGSKKCKFINAHSSNITCLALTHDGRVLATASSKGTLIRCFNTLDGTLIQ
EVRRGADRAEIYCLAFSPTAQWLAVSSDKGTIHVFSLKADSVVLGDDRSTSALESPLSNQ
SALSSLSILKGVLPKYFSSEWSVAQFRLPEGSRCIVAFGQQKNTIMIIGMDGSFRRCQFD
PVNGGQMTQMEEHNFLKQEEHFPSWNEDS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctccgacgatacccttccgcacccacaggcggagtgctcatccccgccccca
aaccaatcccaaatccaactccccctactcatccatcagctctccttcaaccaagacaac
acctgcttttccgctgtcaccgatcgcggtttctttgtattcaacaccgaaccttaccgt
cctcttatctgccgtgacttcgagtctggcctctcccttctctctatgcttttccgcttc
gaagtctttgtccttgtgggctcctcctactctccctctccttctgcggcggccgccaac
accaaagctctcctttgggacgaccatgcttcacgttgcatcggtgagctctcatttcgt
tccccaatccgctctatccgtctccgccgtgataccatcgtggtcattctcttgcacaaa
atctacctgtacaacttttcggatttaaaactcttacaccagctggaaacgacttcaaat
ccgaaaggtttgtgcgaggtttcacagatttccggacctatgctgttggtatgtccaggc
ttgcaaaagggaagcgtcagagtagagaattatgggagtaaaaaatgtaaattcataaat
gctcatagttccaatatcacgtgtttggctttgactcacgatggcagagtcttggctact
gctagtagtaaaggaactctaatcagatgttttaatactttggatgggacattgattcag
gaggtaaggaggggggcagatcgagcggagatatactgccttgctttctctcctactgcg
cagtggctagcggtctcaagtgacaaaggaactattcatgtctttagcctcaaggctgat
tcagtagttttgggggatgataggtcaactagtgcattggaatcacctctttctaatcaa
tcagctttatcatccctttctattttgaaaggtgttttgccaaaatatttcagctcagag
tggtcggtggctcaattccggctgcctgaaggttcccggtgcattgttgcttttggacaa
caaaagaacactatcatgattattggcatggatggaagcttccgtcggtgccagtttgac
ccggtgaacggtggacagatgactcaaatggaagaacacaatttcttaaagcaagaagaa
cattttccaagttggaatgaagattcatag
DBGET
integrated database retrieval system
