Gossypium hirsutum (upland cotton): 107920981
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Entry
107920981 CDS
T04793
Name
(RefSeq) protein SEMI-ROLLED LEAF 2 isoform X1
KO
K21842
protein EFR3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107920981
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
107920981
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EFR3_ARM
EFR3
Motif
Other DBs
NCBI-GeneID:
107920981
NCBI-ProteinID:
XP_016706314
UniProt:
A0A1U8KZV9
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Position
A01:114819539..114831466
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AA seq
1003 aa
AA seq
DB search
MSFISGAISRQVLPACGSLCFLCPGLRTRSRQPVKRYKKMIAEIFPRNQEEGPNERKIGK
LCEYASKNPLRIPKISTSLEQRCYKELRNEKFQSVKTVMCIYRKLLVSCKEQMSLFSSSL
LSIIQTLLDQTRHDEMRIIGCQTLFYFLNNQNDGTCMFKLEGFIPKLCQLAQETGESERE
KNLRAAGLQALSSMIWFMGIHSHISVEFDNIVSVVLENYEDPRKNLENHNGGKSQLEKEV
VKDEGHDSPSPDVPITFPSWDTIVNDNGEQNVSVEDAQNPSFWSRVCLHNMANLAKEATT
ARRVLESLFRYLDSENLWTLQTGLAFPVLKDMQLLMESSGQNTHFLLSLLVKHLDHKSVL
KQPDVQLQILEVTSSLARYSKVEPSVAILGAVSDVMRHLRKSIHCSLDDATLGVETINWN
KNFKEAVDNCLVQLSQKVGDAGPILDAMAVMLENISNITVIARATVSVVYRTAQVIASIP
NPSYLNKAFPESLFHQLLPAMVHPDHETRIGAHRIFSVVLVPTSVCPQQSSVPPLTNKAI
PRTLSRTVSVFSSSAALFEKLRKEKSFSRGNGYIEKQSIVNEGSNNMILNRLNSSYSRAS
SSRNLYVPLQTDKNSLSNSNTQSEAHSLRLSSTQISLLLSSIWAQSVSPQNTPRNYEAIA
HTYSLVLLFSRAKNSSNEALVRSFQLAFSLRCISLNEGGPLPPSCRRSLFTLATSMILFS
SKASNILPIVYSTKVALRERVVDPFLHLVEDCKLKVVDTGSDRPTNVYGSKEDDDLAAKT
LSQIQITPEQDNESLASEILKSLGISSEPELSNTRAQLLSKFLPDDVCPLGSHLTIDQLH
KEYQAGAEESKSTKEDDAFAEPFECQTKDGSGFSQETPKPLDVNQLLDSVWETSDQFGRI
SVSTGPDMSYKDMAHHCETLLTGKQQKMSDLMSVHLRQDSYFQNPFHAEQPGPVFEQTSG
TNSLQQPVGTLPMLCATEYQNHLQPFSFPSSTPYDNILKAAGC
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcatctctggcgccatttcgaggcaagtcttgcctgcttgtggtagcctatgt
ttcctttgccctggactgcgtacaaggtctagacagcctgtcaagaggtataagaagatg
attgccgaaatatttccgcgtaatcaggaggaaggaccaaatgagcgcaagataggaaag
ctgtgtgaatatgcttcaaaaaatcctttacgcatcccaaagatcagtacttcccttgag
caaaggtgttacaaggagttgaggaatgagaagtttcaatcagtgaaaaccgttatgtgt
atttacaggaaattgttggtctcttgtaaggagcaaatgtcattattttctagtagctta
ctgagcattatacagacactgctggatcaaacacggcatgatgaaatgagaattatagga
tgtcagactcttttttactttttaaataatcagaatgatggcacttgcatgtttaagtta
gaaggctttattccaaaactatgtcaattagctcaagaaactggagaaagtgaaagggaa
aaaaatctacgtgcagctgggttgcaagcactttcttcaatgatttggtttatgggcata
cactctcacatttcggtggaattcgataatattgtttcagtagtcttggaaaattatgaa
gacccaaggaaaaatttggagaaccataatggtggcaaaagtcagttggaaaaagaagtg
gtaaaggatgagggtcatgactctccatcaccagatgtccccataacatttccttcttgg
gacacaattgtgaatgacaatggagaacaaaatgtctcagtggaagacgcccaaaatccc
agcttctggtccagagtttgcttacataacatggcaaacctagccaaggaagctacaaca
gcaagacgtgttcttgagtctttgttccgttacttggatagtgaaaacttatggactctt
caaactggtcttgcctttccagtcttaaaggatatgcagcttttaatggagagctctgga
cagaatacacattttttgctgtcattattagttaagcatcttgaccataaaagtgttctc
aaacaacctgacgtgcaacttcagattctagaggttacatcctcccttgctcgatattca
aaagttgagccttctgtagcaatacttggtgcagttagtgatgttatgaggcatttacga
aagagcatacattgctcacttgacgatgcaactctgggagttgaaactataaattggaac
aagaactttaaagaagctgtagataactgccttgtacagttatcgcaaaaggttggagat
gcaggtccaattcttgatgctatggctgtgatgttggagaacatctcaaatattacagtt
atagctagagctacagtctctgttgtctatcgaactgctcaagttattgcttcaattcca
aatccatcttatctaaacaaggcttttcctgagtcattgttccatcaattactcccagct
atggtccaccctgaccatgaaacacgaattggtgctcaccgtatcttttctgttgtgctt
gtcccaacttcagtttgccctcaacaatcctctgttcctccattaacaaacaaagccatt
ccaagaacactttcaagaactgtctctgtcttttcttcatcagctgccctttttgagaag
ctaaggaaggagaaatctttctcaagggggaatggttatatagaaaaacaaagtattgtt
aatgagggaagtaataatatgattctgaatagattgaattcatcttatagtcgagcatct
agttcaagaaatctgtatgtacctttgcaaacagataaaaattctctgagcaattcaaat
acacaatctgaggcccattctctacggcttagtagcacccagatcagtctcttgctttca
tcaatttgggcacagtctgtctctcctcaaaatacaccacgaaactatgaagcaattgct
catacatacagcctagtgttgctcttctctcgagccaagaattctagcaatgaggctctt
gttcgtagtttccagctagccttttcattgcgatgtatctctcttaatgaaggagggcca
cttccaccatcatgtcgtagatcacttttcaccttggcaacatcaatgatcctattttca
tcaaaagcatccaatattcttcctattgtctattctacgaaggttgctcttagagaaaga
gtggttgatccattcttgcacttggtggaagattgcaagttgaaggtagttgacactggg
tctgaccgaccaacaaatgtttatggatctaaagaagatgacgatttggctgcaaagaca
ctctcacaaattcagattaccccagagcaagataatgaaagccttgcttctgagatcttg
aaaagcttgggaatttcgtcagaacctgaattgtccaatacacgagcacagctgttaagt
aaattcttgccagatgatgtgtgtcctctaggttcccacttgactatcgatcaactgcat
aaagaatatcaagctggtgcggaagagagtaaatctaccaaggaggatgatgcttttgca
gaaccatttgaatgtcaaaccaaggatggttcagggttttcccaggaaactccaaaaccc
ttggatgttaatcaactccttgattcagtatgggagacttcagatcagttcggaagaata
tctgtctcaacaggacctgacatgtcttacaaggatatggcccatcattgtgagacactc
ctaaccgggaaacagcagaagatgtctgatttgatgagtgtccacctgagacaagacagc
tattttcaaaatccttttcatgcagaacagcctggccctgtctttgagcaaacaagtggt
accaactcattgcaacagcctgttggcactcttccaatgctgtgtgcaactgagtaccag
aaccatctccagcccttcagttttccgtcctcaactccatatgataacatcctaaaagct
gctggttgttga
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