Gossypium hirsutum (upland cotton): 107921233
Help
Entry
107921233 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107921233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107921233
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107921233
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107921233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-Di19
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
107921233
NCBI-ProteinID:
XP_016706598
UniProt:
A0A1U8L0M3
LinkDB
All DBs
Position
D01:30471007..30473780
Genome browser
AA seq
306 aa
AA seq
DB search
MAPEGSACKEVESYPAVADYAIATTKPESNSMTTKSSFGFVGKHGIQSNNGVYELLECPV
CKNLMYPPIHQSPNGHTSCLNCKNRVHNCCPSCRYDLGNIRCLALERFAESLELPCKYHS
LGCHEILPYYSKLKHEQHCQFRPYNCPYAGSDCSITGDIPTLIAHLKDDHKVDMHDGCTF
NHRYVKLNPHEVENATWMLTVFKCFGKQFCLHFEAFQMGMAPVYMAFLRFMGDDSEAKKF
SYCLEVGANGRKLTWQGIPRSIRDSHRKVRDSQDGLVVQRNLALYFSGGDRQELKLRVTG
RIWKEA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgaaggcagtgcttgcaaagaagttgaatcttatcctgccgttgcggattac
gccattgctacaacaaaacccgagagtaattctatgacgacaaaaagttcttttggtttt
gttggaaaacatggaattcagtccaacaatggtgtttatgagctccttgaatgtcctgta
tgcaaaaacttgatgtacccgccaattcaccagtccccaaatggacacacttcgtgtttg
aattgcaagaatagagtgcacaactgttgtccgtcatgccggtatgatctcggaaatata
aggtgtttagctttggagagatttgcggaatccttggaactcccttgtaaatatcatagc
ctaggttgccatgaaattctcccatattacagcaagcttaagcacgagcaacactgtcaa
tttcgtccttacaattgcccctatgctggttctgattgttccatcacaggtgacatccca
accctcattgcacatctcaaggatgatcataaggtcgacatgcacgatggatgtaccttc
aaccatagatatgtgaaattgaatccacatgaagtagaaaatgccacatggatgcttact
gtgttcaaatgttttggaaaacaattctgcttgcatttcgaggctttccagatggggatg
gcacctgtctatatggcctttttacgttttatgggtgatgatagtgaagcaaaaaagttc
agttattgtttggaagttggtgccaacggtcgtaagctaacatggcaggggattccaagg
agcattcgtgacagtcatcggaaagttcgtgacagtcaagatggacttgttgtccaaagg
aatctagctctatacttttccggtggcgataggcaagagctgaagttgagggtaactggc
cgtatttggaaagaagcataa
DBGET
integrated database retrieval system
