Gossypium hirsutum (upland cotton): 107921249
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Entry
107921249 CDS
T04793
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107921249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107921249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107921249
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107921249
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107921249
Exosomal proteins of other body fluids (saliva and urine)
107921249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
MutS_III
Prominin
Synaptobrevin
GP41
PigL_N
Syntaxin_2
T2SSF
COG2p_C
MCPsignal
Enkurin
G6B
DUF6688
PRA-PH
T3SS_needle_E
DUF4410
Motif
Other DBs
NCBI-GeneID:
107921249
NCBI-ProteinID:
XP_016706614
UniProt:
A0A1U8L0N7
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Position
D01:29432178..29433889
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AA seq
305 aa
AA seq
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MNDLFSGSFSRPPSSEFSPDHHVIQMTPQPSSPAGDGVDHLHKFFKDVESINGELKELEK
LNGDLSSSHEQSKTLHNAKAVKELRAKMDSDVNMALQKAKLIKARLEALDRSSDTSRNMP
GCGPGSSSDRTRTSVVNGLRKKLKDSMESFNGLREKISSEYRETVERRYFTVTGENPDVR
TLDLLISTGESETFMQKAIQEQGRGRVLDTINEIQERHDAVKDLEKNLKELHQVFMDMAV
LVQTQGEELDDIERQVNRANSYVRDGATRLQTARNYQKNTRKWTCYAIILLLIILIIVLV
ILRPW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctgttttcaggctctttctctcgacccccaagctcagaattttcccctgat
caccatgtaatccagatgactcctcaaccctcctcccccgccggcgacggcgttgaccac
ctccacaagttcttcaaggacgtcgagtccatcaacggtgagctcaaagaactcgagaag
ctcaacggcgacctctcctcctcccacgagcaaagcaagacgttgcacaacgcgaaagcc
gtgaaggaattgagagcaaagatggattccgacgtcaacatggcgttgcagaaggccaag
cttattaaggccaggctcgaagcacttgaccggtccagcgacacaagccggaacatgccc
gggtgtggaccggggtcatcttcggaccggacgaggacgtcggtggtcaacgggttgagg
aagaagttgaaggattcgatggaaagctttaatggtttgagagaaaagatatcgtctgag
tatagagaaactgttgagagaaggtattttacggtcaccggcgaaaacccagatgtgcgg
actcttgatcttttgatttcaacaggggaaagtgagacatttatgcaaaaagcgattcaa
gaacaagggaggggaagagttttggatacaataaacgagattcaagaaaggcacgatgct
gttaaggacttggagaagaatctcaaagaacttcaccaagttttcatggatatggcggtg
ctggttcaaacccaaggtgaagaactggacgatatcgagaggcaagtgaaccgagctaat
tcgtacgtaagagacggagctacccgacttcaaaccgctagaaattatcaaaaaaatacc
cgcaaatggacttgttatgctatcatactcctcctcatcatcttgattatcgtgttagtc
atactgagaccgtggtaa
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