Gossypium hirsutum (upland cotton): 107921291
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Entry
107921291 CDS
T04793
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107921291
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107921291
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
RMC1_N
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
107921291
NCBI-ProteinID:
XP_016706653
UniProt:
A0A1U8KW55
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Position
D01:48735828..48741218
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AA seq
609 aa
AA seq
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MASLIETYACAPSTERGRGILISGDPKTNSILYCNARSVFIRYLDRPLHIAVYGDHSYPV
TVARYSPNGEWIASADVSGIIRIWGTHNDFVLKNEFKVLSGRIDDLQWSPDGLRIVACGD
GKGKSFVRAFMWDSGSTVGDFDGHSKRVLSCHFKPTRPFRIASCGEDFLVNFYEGPPFKF
KLSHREHSNFVNCIRFSPDGSKLISVSSDKKGIIYDAKTGDTMGQLSSEDGHTGSIYAVS
WSGDGKHVLTVSADKTAKIWEIFEDGTGKVSKTLECSGSGGVEDMLVGCLWQNGHLITVS
LSGTINLYSASDPDKQPLCLSGHMKNVNTLTLIESNEKIILSSSFDGSILRWTPGTGHSG
KLQRKDSSQIKCLVATKEEIMTSGYDNKVWRISLDQDKAGEAEHIDVGSQPKDLSQAINS
PDLALVSLDSGVVLLKDMQILSNINLGFSVTASVIAPDGSEAIVGGQDGKLHIYSVSGDS
LTEEATLEKHRGPISVIRYSPDFSMFASADLNREAVVWDRTSKEVKLNNMLFHTARINCL
AWSPNSTMVATGSLDTCVIIYEVGKPASSRITVKNAHPGGVYGLVFIDACNVASSGEDAC
IRVWKIVQQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctagtctcattgaaacctatgcctgcgccccttccacggaacgaggccgtggaatt
ctaatctccggcgatcccaaaaccaactccatcctttactgcaacgcaaggtccgttttc
attcgttaccttgaccgccctcttcacatcgccgtttatggagatcacagctatcccgtc
actgtcgctcgttactcccccaacggcgagtggattgcctccgctgacgtctctggaatt
atacgaatctggggtactcataacgacttcgttttgaagaatgagttcaaggtcctttcc
ggtcggatcgatgatctacagtggtcccctgatggcttaaggatcgttgcctgtggcgat
ggcaaaggaaaatcctttgttcgcgcttttatgtgggattcggggtcaacagtgggggac
tttgatggccactcgaagagggtgctaagctgtcattttaaaccgacgaggccatttcga
attgcaagttgtggagaagatttcttggtgaatttttatgaaggtccaccctttaagttc
aagttatctcacagggagcattcaaattttgtcaactgcattagattttccccagatggc
agcaaactaattagcgtaagctcagataagaagggtataatatatgatgcaaagactggc
gacacaatggggcagttgtccagtgaagatggtcatacaggtagcatttatgctgttagc
tggagtggagatggtaaacatgtactaactgtttctgctgacaagactgccaagatatgg
gagatttttgaggatggtactggaaaagtaagtaaaactttggaatgctctggatctggt
ggagtggaagacatgcttgttggatgtctgtggcagaatggtcatctcattacagtttcc
ctttctggcacaattaacttatactctgctagtgatcctgataaacaaccattatgtttg
tctggacatatgaagaacgtaaatacattaactttaatcgaaagcaacgaaaagattatt
ctatccagcagcttcgatggatctatccttcgatggactccagggactggacacagtggc
aaattacagaggaaagatagttctcaaattaaatgtttggttgctacaaaagaggagata
atgacatctggatacgacaataaggtatggagaatttctcttgatcaagacaaagctgga
gaggcagaacatatagatgttggcagtcaaccaaaggacttgagccaggccattaattcc
cctgatctggctttagtttcattggattctggagttgtattgcttaaggatatgcaaata
ctttcaaacatcaaccttggattttcagtgacagcgtctgttattgcacctgatggaagt
gaggcaattgtggggggccaggatggtaagttgcatatatattctgtctcaggtgattct
cttacagaagaagcaacccttgagaagcatagaggtccaattagcgtaatacggtattca
ccagatttttccatgtttgcttctgctgatctaaaccgcgaagcagttgtttgggatcgt
acctccaaagaggtgaagcttaataacatgttgttccacacagctcgtatcaattgcctt
gcttggtctcctaatagcactatggttgctacaggatcactagacacttgtgtaatcata
tatgaagttgggaaacctgcttcaagtcgcataactgttaagaatgctcatcctggtgga
gtttatggtttggtttttattgatgcctgcaatgtggctagttcaggggaggacgcctgc
attcgtgtctggaagatagtgcagcaataa
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